VIMSS5222208 has 295 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-15 43.0 0.6 1.2e-14 41.4 0.0 2.1 2 VIMSS5222208
Domain annotation for each sequence (and alignments):
>> VIMSS5222208
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.2 0.2 0.24 0.24 35 35 .. 90 90 .. 59 130 .. 0.46
2 ! 41.4 0.0 1.2e-14 1.2e-14 1 84 [] 189 267 .. 189 267 .. 0.90
Alignments for each domain:
== domain 1 score: -1.2 bits; conditional E-value: 0.24
C CS
DUF3298 35 a 35
a
VIMSS5222208 90 A 90
1 PP
== domain 2 score: 41.4 bits; conditional E-value: 1.2e-14
HHCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEHC CS
DUF3298 1 sdLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipys 84
+dL++p+ +++l kl e++k++ + + la ++ + + + ++ ++nf l d+gl++ + +Yei+Py+ G p+ +ipy+
VIMSS5222208 189 EDLLRPE--KKAALEKLAHEAFKAWVTDSK---LANSVSEYEQAWPFKLTENFLLGDQGLILQYGEYEIGPYVVGLPRLVIPYD 267
5999999..899999999*******98666...6666666689***************************************96 PP
Or compare VIMSS5222208 to CDD or PaperBLAST