VIMSS534023 has 238 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-10 27.6 0.0 5.6e-10 26.4 0.0 1.6 2 VIMSS534023
Domain annotation for each sequence (and alignments):
>> VIMSS534023
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.8 0.0 0.76 0.76 66 78 .. 106 118 .. 71 120 .. 0.64
2 ! 26.4 0.0 5.6e-10 5.6e-10 3 71 .. 154 215 .. 152 224 .. 0.83
Alignments for each domain:
== domain 1 score: -2.8 bits; conditional E-value: 0.76
TTSSS-GGG-SEE CS
DUF3298 66 pYeiaPyaaGipe 78
Y + aaG+++
VIMSS534023 106 RYSSGSQAAGTQS 118
3555666777665 PP
== domain 2 score: 26.4 bits; conditional E-value: 5.6e-10
CBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS- CS
DUF3298 3 LFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaP 71
LF+pg++ lq++ +++++ + + + + p + ++ +yq+f++tdd +v++f++ + P
VIMSS534023 154 LFRPGTQPLQEILPIVQKTLADRYRATV----SIPP---ATGLDPANYQSFAITDDAIVFFFDQNALQP 215
9*******************88774333....3333...367899******************988877 PP
Or compare VIMSS534023 to CDD or PaperBLAST