VIMSS535794 has 255 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-18 52.2 0.0 1.1e-17 51.1 0.0 1.6 2 VIMSS535794
Domain annotation for each sequence (and alignments):
>> VIMSS535794
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.8 0.0 0.74 0.74 35 48 .. 80 98 .. 71 124 .. 0.57
2 ! 51.1 0.0 1.1e-17 1.1e-17 2 84 .] 148 247 .. 147 247 .. 0.89
Alignments for each domain:
== domain 1 score: -2.8 bits; conditional E-value: 0.74
CCCCTTT.....TTTSS.T CS
DUF3298 35 aglpeps.....rddrlil 48
l++++ + +++
VIMSS535794 80 RTLVNNWrnansSMAADSY 98
3333333222222222222 PP
== domain 2 score: 51.1 bits; conditional E-value: 1.1e-17
HCBSSC.T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS.......-GGG.........-SEEEE CS
DUF3298 2 dLFkpg.saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia.......Pyaa.........Gipefe 80
dL +++ +++++l+ ++i+ +++++++++++++++++++++ +d++++++y+++++t+d+l++y+p+Y+++ + G+++++
VIMSS535794 148 DLTTSNpLTAIPPLAqPFIETALNQAPPPHDPGTYPFVVDRWtPDKVYSGAYKAWAITPDELILYMPDYPVGhdepinfA--TglpqwfmdgGTVQAH 243
8888888899**************************************************************88887440..3555555799999999 PP
EEHC CS
DUF3298 81 ipys 84
ip+s
VIMSS535794 244 IPLS 247
9986 PP
Or compare VIMSS535794 to CDD or PaperBLAST