VIMSS540311 has 228 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.3e-16 45.1 0.0 1.6e-15 44.2 0.0 1.5 1 VIMSS540311
Domain annotation for each sequence (and alignments):
>> VIMSS540311
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.2 0.0 1.6e-15 1.6e-15 3 84 .] 147 221 .. 145 221 .. 0.88
Alignments for each domain:
== domain 1 score: 44.2 bits; conditional E-value: 1.6e-15
CBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEHC CS
DUF3298 3 LFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipys 84
L++ +++ l+++ ++++ +++k+ +q + p+ + ++ +yqnf++t+dg++++f+p e+ P aaG+ ++ +p s
VIMSS540311 147 LWQADTDPLPVVFPIVQGELSKQTGQQV----SIAPN---AGLDPVNYQNFAVTNDGVIFFFNPGELLPEAAGPTQVLVPRS 221
67788899999*********99996555....55555...68999***********************************75 PP
Or compare VIMSS540311 to CDD or PaperBLAST