VIMSS574407 has 239 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-15 42.8 0.6 2.2e-13 37.4 0.1 2.2 2 VIMSS574407
Domain annotation for each sequence (and alignments):
>> VIMSS574407
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 3.9 0.1 0.006 0.006 35 76 .. 87 134 .. 56 142 .. 0.75
2 ! 37.4 0.1 2.2e-13 2.2e-13 2 83 .. 154 235 .. 153 236 .. 0.77
Alignments for each domain:
== domain 1 score: 3.9 bits; conditional E-value: 0.006
CCCCTTT......TTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-S CS
DUF3298 35 aglpeps......rddrlilgyqnfyltddglviyfppYeiaPyaaGi 76
+p++ ++++li gy++ + + + + ++ Ye+ +a G
VIMSS574407 87 SVSPDDMaksstpQNFELIIGYDDIVRDGNYISFVLSVYEYMGGAHGL 134
333333355567789999***********************9999886 PP
== domain 2 score: 37.4 bits; conditional E-value: 2.2e-13
HCBSSC.T.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTT..TTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 2 dLFkpg.saylqrlsklikeqikkerekqeedelaglpeps..rddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
d+ +p ++ l +ls++ ++ + ++ +k + +++ + ++++ ++++ f + ++ + i+f +Y++aPy++G pe+ ip+
VIMSS574407 154 DVVRPAsKNWLVKLSNEARKILMEKVKKGDLSSDESM---IkeGTEPKLENFKVFKIENGKIKIIFEQYQVAPYSEGLPEIIIPI 235
6667776778888888888777666654443333333...1347999*************************************7 PP
Or compare VIMSS574407 to CDD or PaperBLAST