VIMSS5791021 has 358 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-14 39.8 6.9 5.6e-14 39.3 0.3 3.2 2 VIMSS5791021
Domain annotation for each sequence (and alignments):
>> VIMSS5791021
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 2.0 1.6 0.024 0.024 20 68 .. 175 223 .. 45 227 .. 0.79
2 ! 39.3 0.3 5.6e-14 5.6e-14 2 83 .. 252 327 .. 251 328 .. 0.89
Alignments for each domain:
== domain 1 score: 2.0 bits; conditional E-value: 0.024
HHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEE.ETTEEEEEE-TTS CS
DUF3298 20 eqikkerekqeedelaglpepsrddrlilgyqnfyl.tddglviyfppYe 68
+q+k+ ek+ +++l+ l+e + + ++ yl +vi+f+ Y+
VIMSS5791021 175 NQLKTVLEKDYQESLETLKEGM-TLGISRTAETIYLgQRHNIVIFFQNYD 223
4555555666666666666553.333333344455535667799999986 PP
== domain 2 score: 39.3 bits; conditional E-value: 5.6e-14
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
dL++p +ls++++ ++++e++ ++++ +++++ ++f +tddg+ +++ppY ++P a+G+++ ++p+
VIMSS5791021 252 DLLSPA--KQVELSAILWSYYEQRNEPDANGKYSTFTP----KQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPW 327
777777..788999999999999998888877777765....79*************************************9 PP
Or compare VIMSS5791021 to CDD or PaperBLAST