VIMSS589209 has 271 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-13 37.4 0.3 8.1e-13 35.5 0.2 2.0 2 VIMSS589209
Domain annotation for each sequence (and alignments):
>> VIMSS589209
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.3 0.0 0.25 0.25 17 39 .. 93 107 .. 83 162 .. 0.59
2 ! 35.5 0.2 8.1e-13 8.1e-13 13 81 .. 188 250 .. 167 251 .. 0.72
Alignments for each domain:
== domain 1 score: -1.3 bits; conditional E-value: 0.25
HHHHHHHHHTCH.TTS.HCCCCT CS
DUF3298 17 likeqikkerekqeedelaglpe 39
+i+++i d++a + +
VIMSS589209 93 IINKEIH--------DYYADVFV 107
4444443........33333222 PP
== domain 2 score: 35.5 bits; conditional E-value: 8.1e-13
HHHHHHHHHHHHHTCH.TTS.HCCCCTTT...TTTSS.TTTSSEEEETTEE.EEEE-TTSSS-GGG-SEEEEE CS
DUF3298 13 rlsklikeqikkerekqeedelaglpeps...rddrlilgyqnfyltddgl.viyfppYeiaPyaaGipefei 81
+l++ +++q + + ++++ ++++++ +nfy++++g ++ +++Ye+aPyaaG+++ e+
VIMSS589209 188 KLKNALWKQYEYWCNDNQ----------MqpfIAKEDFNISNNFYINQNGGvTFEYQLYELAPYAAGPVSLEL 250
344444444444444333..........24556789**********665544****************98875 PP
Or compare VIMSS589209 to CDD or PaperBLAST