VIMSS5929820 has 263 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.1e-18 51.4 0.0 3.3e-17 49.6 0.0 1.8 2 VIMSS5929820
Domain annotation for each sequence (and alignments):
>> VIMSS5929820
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.1 0.0 0.22 0.22 41 54 .. 88 109 .. 70 124 .. 0.57
2 ! 49.6 0.0 3.3e-17 3.3e-17 2 83 .. 150 250 .. 149 251 .. 0.89
Alignments for each domain:
== domain 1 score: -1.1 bits; conditional E-value: 0.22
T........TTTSS.TTTSSEE CS
DUF3298 41 s........rddrlilgyqnfy 54
+ +d + ++yq+f
VIMSS5929820 88 WrekgadmvQDSWGEENYQQFG 109
2333333334567777777775 PP
== domain 2 score: 49.6 bits; conditional E-value: 3.3e-17
HCBSSC...T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS........-GGG......-SEEE CS
DUF3298 2 dLFkpg...saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia........Pyaa......Gipef 79
d+ k g a +++l+ +++ ++++++++++++++++++++++ +d+++++gy++++lt+ +l++y p+Y++a P+ G++e+
VIMSS5929820 150 DIVKAGldpLAVIPPLAePFVAAALDRAAPPHQPGTYPFTVDRWtPDKVYSGGYKAWALTPSELILYLPDYPVAhdnpinyePGMPvwsmdgGAVEA 246
7777777777888999999999****************************************************999987774444777799***** PP
EEEH CS
DUF3298 80 eipy 83
+ip+
VIMSS5929820 247 HIPI 250
*997 PP
Or compare VIMSS5929820 to CDD or PaperBLAST