VIMSS5933557 has 259 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-19 56.2 0.0 5.4e-19 55.3 0.0 1.4 1 VIMSS5933557
Domain annotation for each sequence (and alignments):
>> VIMSS5933557
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 55.3 0.0 5.4e-19 5.4e-19 2 84 .] 152 251 .. 151 251 .. 0.97
Alignments for each domain:
== domain 1 score: 55.3 bits; conditional E-value: 5.4e-19
HCBSSC.T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS........-GGG......-SEEEEE CS
DUF3298 2 dLFkpg.saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia........Pyaa......Gipefei 81
dL +++ +++++l+ ++i+++++++++++++++++++ +++ +d+++++gy +++lt+d+lv+y p+Y+++ P+aa G+++++i
VIMSS5933557 152 DLTTSNpLTAIPPLGqPYIQAALDAAAPPHDPGTYPFVADRWtPDKVYSGGYRAWALTPDELVLYLPDYPVGhdepidftPGAAqwsmdgGAVVAHI 248
888888889**************************************************************************************** PP
EHC CS
DUF3298 82 pys 84
p+s
VIMSS5933557 249 PLS 251
*86 PP
Or compare VIMSS5933557 to CDD or PaperBLAST