VIMSS730150 has 227 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.4e-17 48.9 8.4 8.3e-17 48.3 1.0 2.5 3 VIMSS730150
Domain annotation for each sequence (and alignments):
>> VIMSS730150
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.3 0.0 1 1 61 70 .. 17 26 .. 6 32 .. 0.76
2 ! 4.9 0.7 0.0029 0.0029 17 76 .. 64 130 .. 47 134 .. 0.75
3 ! 48.3 1.0 8.3e-17 8.3e-17 10 83 .. 157 223 .. 138 224 .. 0.69
Alignments for each domain:
== domain 1 score: -3.3 bits; conditional E-value: 1
EEEE-TTSSS CS
DUF3298 61 viyfppYeia 70
v++f++Y a
VIMSS730150 17 VLFFALYSAA 26
7899999876 PP
== domain 2 score: 4.9 bits; conditional E-value: 0.0029
HHHHHHHHHTCH.TTS.HCCCCTTT.......TTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-S CS
DUF3298 17 likeqikkerekqeedelaglpeps.......rddrlilgyqnfyltddglviyfppYeiaPyaaGi 76
++++i+k+++ +e++++ ++++ +++++++ ++ y t + l i Y + +a G+
VIMSS730150 64 SLQNKINKDFKHYIEQSYKDYVKNKkdgqqhgYQTDYQTSFEVKYRTGQKLSILTSNYVYSGGAHGN 130
5566666666666666666666655666799989999999999999999999999999998888886 PP
== domain 3 score: 48.3 bits; conditional E-value: 8.3e-17
HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 10 ylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
+++ + +i + i+k + + p+ + +d +++++fy+t+dg+ i+f++Y++aPyaaG+p++ +p+
VIMSS730150 157 KMDKTKTYIYNYIQKHS----D---IFFPDVKKKDIVLGKNTAFYYTNDGIAIVFQQYDVAPYAAGNPVVAVPK 223
33333333333333333....2...23333336788999*********************************96 PP
Or compare VIMSS730150 to CDD or PaperBLAST