VIMSS950554 has 280 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-10 27.6 0.0 5.4e-10 26.5 0.0 1.6 1 VIMSS950554
Domain annotation for each sequence (and alignments):
>> VIMSS950554
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.5 0.0 5.4e-10 5.4e-10 9 83 .. 171 263 .. 164 264 .. 0.77
Alignments for each domain:
== domain 1 score: 26.5 bits; conditional E-value: 5.4e-10
.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTT..................TTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 9 aylqrlsklikeqikkerekqeedelaglpeps..................rddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
a+ +++++ + +++ +++e++ e + ++e+ ++ ++ + n + + l ++fppY+++Py+ G++++eip
VIMSS950554 171 AGWEQIGQAVAQRLHAAAEQRVEADRVPVEEQAeqvasadrmiaegtaaqaDNFAQFVPVLNPAGKISALRFVFPPYQVGPYSDGTQTAEIPA 263
5667778888888877776666666655555557777788888888888877777777777888888999**********************5 PP
Or compare VIMSS950554 to CDD or PaperBLAST