NP_660130.2 has 981 amino acids
Query: CUPID [M=136]
Accession: PF11819.12
Description: Cytohesin Ubiquitin Protein Inducing Domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-59 185.8 7.4 4.5e-59 184.6 7.4 1.7 1 NP_660130.2
Domain annotation for each sequence (and alignments):
>> NP_660130.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 184.6 7.4 4.5e-59 4.5e-59 1 136 [] 341 475 .. 341 475 .. 0.98
Alignments for each domain:
== domain 1 score: 184.6 bits; conditional E-value: 4.5e-59
CUPID 1 eskgelissssgsllssgsdesessekdkkeklralkkkqkaLqekLelkleELkklClrEAeLtGklpkeypLepgekppqvrRrigaafkldeeki 98
e+k+++i++s+gsl+ssgs++se e++k+ek+ +lkkk+k LqekL +k+eELkk+ClrEAeLtG++pkeypL+ gekppqvrRr+g++fkld+ ++
NP_660130.2 341 EAKSQFIMASNGSLISSGSQDSEGMEEQKREKILELKKKEKLLQEKLLQKVEELKKICLREAELTGRMPKEYPLNIGEKPPQVRRRVGTTFKLDD-NL 437
6799*******************************************************************************************.58 PP
CUPID 99 lqkeedpeLesLerelalqqqiveAarrLaeeenlske 136
l++eedp+L++Le+++ +qq++veAa++La+e++l+k+
NP_660130.2 438 LPTEEDPALQELESNFLIQQKLVEAAKKLASEPDLCKT 475
999*********************************95 PP
Or compare NP_660130.2 to CDD or PaperBLAST