SwissProt::Q920B0 has 1035 amino acids
Query: CUPID [M=136]
Accession: PF11819.12
Description: Cytohesin Ubiquitin Protein Inducing Domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-59 185.8 7.4 4.8e-59 184.5 7.4 1.7 1 SwissProt::Q920B0
Domain annotation for each sequence (and alignments):
>> SwissProt::Q920B0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 184.5 7.4 4.8e-59 4.8e-59 1 136 [] 395 529 .. 395 529 .. 0.98
Alignments for each domain:
== domain 1 score: 184.5 bits; conditional E-value: 4.8e-59
CUPID 1 eskgelissssgsllssgsdesessekdkkeklralkkkqkaLqekLelkleELkklClrEAeLtGklpkeypLepgekppqvrRrigaafk 92
e+k+++i++s+gsl+ssgs++se e++k+ek+ +lkkk+k LqekL +k+eELkk+ClrEAeLtG++pkeypL+ gekppqvrRr+g++fk
SwissProt::Q920B0 395 EAKSQFIMASNGSLISSGSQDSEGMEEQKREKILELKKKEKLLQEKLLQKVEELKKICLREAELTGRMPKEYPLNIGEKPPQVRRRVGTTFK 486
6799**************************************************************************************** PP
CUPID 93 ldeekilqkeedpeLesLerelalqqqiveAarrLaeeenlske 136
ld+ ++l++eedp+L++Le+++ +qq++veAa++La+e++l+k+
SwissProt::Q920B0 487 LDD-NLLPTEEDPALQELESNFLIQQKLVEAAKKLASEPDLCKT 529
***.58999*********************************95 PP
Or compare SwissProt::Q920B0 to CDD or PaperBLAST