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Align CharProtDB::CH_090986 to PF11879 (DUF3399)

CharProtDB::CH_090986 has 490 amino acids

Query:       DUF3399  [M=76]
Accession:   PF11879.12
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    1.3e-11   31.1   2.6    2.8e-11   30.0   2.6    1.6  1  CharProtDB::CH_090986  


Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_090986  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   2.6   2.8e-11   2.8e-11       2      20 ..     471     489 ..     470     490 .] 0.93

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 2.8e-11
                DUF3399   2 tsllEsQHHHLLhCLEKTT 20 
                            ++++E QHHHLL+CLEKTT
  CharProtDB::CH_090986 471 EDIFELQHHHLLRCLEKTT 489
                            689***************9 PP



Or compare CharProtDB::CH_090986 to CDD or PaperBLAST