NP_004971.2 has 655 amino acids
Query: DUF3399 [M=77]
Accession: PF11879.11
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-43 132.1 7.3 1.2e-42 130.7 7.3 1.8 1 NP_004971.2
Domain annotation for each sequence (and alignments):
>> NP_004971.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 130.7 7.3 1.2e-42 1.2e-42 2 76 .. 469 562 .. 468 563 .. 0.98
Alignments for each domain:
== domain 1 score: 130.7 bits; conditional E-value: 1.2e-42
DUF3399 2 tsllEsqHHHLLhCLEKTT...................nheFvdEqlyeqnclevslqkrpssrspslssqeglsssCCsrrakkstrlpnssv 76
tsl+EsqHHHLLhCLEKTT nheF+dEq++eqnc+e+s+q++ps+rspslss+ gl+++CCsrr+kk+t+lpns++
NP_004971.2 469 TSLIESQHHHLLHCLEKTTglsylvddpllsvrtstikNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNL 562
89******************************************************************************************96 PP
Or compare NP_004971.2 to CDD or PaperBLAST