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Align XP_005630924.1 to PF11879 (DUF3399)

XP_005630924.1 has 679 amino acids

Query:       DUF3399  [M=77]
Accession:   PF11879.11
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-43  132.0   7.3    1.2e-42  130.6   7.3    1.8  1  XP_005630924.1  


Domain annotation for each sequence (and alignments):
>> XP_005630924.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.6   7.3   1.2e-42   1.2e-42       2      76 ..     469     562 ..     468     563 .. 0.98

  Alignments for each domain:
  == domain 1  score: 130.6 bits;  conditional E-value: 1.2e-42
         DUF3399   2 tsllEsqHHHLLhCLEKTT...................nheFvdEqlyeqnclevslqkrpssrspslssqeglsssCCsrrakkstrlpnssv 76 
                     tsl+EsqHHHLLhCLEKTT                   nheF+dEq++eqnc+e+s+q++ps+rspslss+ gl+++CCsrr+kk+t+lpns++
  XP_005630924.1 469 TSLIESQHHHLLHCLEKTTglsylvddpllsvrtstikNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNL 562
                     89******************************************************************************************96 PP



Or compare XP_005630924.1 to CDD or PaperBLAST