PaperBLAST – Find papers about a protein or its homologs

 

Align WP_014310323.1 to PF11896 (GlgE_dom_N_S)

WP_014310323.1 has 678 amino acids

Query:       GlgE_dom_N_S  [M=179]
Accession:   PF11896.12
Description: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-61  194.5   1.4    2.1e-61  193.4   1.4    1.6  1  WP_014310323.1  


Domain annotation for each sequence (and alignments):
>> WP_014310323.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.4   1.4   2.1e-61   2.1e-61       2     179 .]       7     197 ..       6     197 .. 0.94

  Alignments for each domain:
  == domain 1  score: 193.4 bits;  conditional E-value: 2.1e-61
    GlgE_dom_N_S   2 rivIedVsPevdgGrfpaKavvGeeveVeAdvfrdGhdavaatvvlraegekewrevpMt..pggnDrweaeftldeeGrwefrveAWsDpfatW 94 
                     r++IedV+P+v++Gr p KavvGe ++V+A v+r+Ghda+aat+v+++    + +++ M+  + ++Dr+ a+f +d++G+w+frv+AWsD++atW
  WP_014310323.1   7 RLAIEDVRPKVSCGRRPSKAVVGEMIPVSALVWREGHDAIAATLVVTDPA-GQSSSIAMAtkKFDPDRMWASFVPDRPGTWTFRVDAWSDAVATW 100
                     99*********************************************866.8999****988666****************************** PP

    GlgE_dom_N_S  95 rhdlekkveagqdvele...leeGaelleraaeraee.......ealraaaaalrde..peerlaaalspelaallarhplrelvtrseklpvlv 177
                     rh+++ k+eagq+ e+    +e+Ga+l+e a++ a +        a++++++alr++  +++r+a+als+e++ lla+hp+rel+tr++++++ v
  WP_014310323.1 101 RHAVTTKIEAGQSPEELyndIEHGAALFESAIASAPKaerktlaPAFTRVINALRSDapLRTRVAPALSAEITYLLAEHPVRELLTRGHTYSISV 195
                     ************99998888************8886699977777788999999888899*********************************** PP

    GlgE_dom_N_S 178 dR 179
                     +R
  WP_014310323.1 196 ER 197
                     *9 PP



Or compare WP_014310323.1 to CDD or PaperBLAST