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Align XP_002061352.2 to PF11901 (DM9)

XP_002061352.2 has 287 amino acids

Query:       DM9  [M=115]
Accession:   PF11901.12
Description: DM9 repeat
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.1e-100  316.9   9.1    1.6e-49  153.0   1.0    4.0  5  XP_002061352.2  


Domain annotation for each sequence (and alignments):
>> XP_002061352.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.1e-07   2.1e-07      55      87 ..       3      36 ..       1      37 [. 0.85
   2 !  153.0   1.0   1.6e-49   1.6e-49       1     115 []      24     135 ..      24     135 .. 0.98
   3 !   34.9   0.0   6.6e-13   6.6e-13      32      82 ..     126     174 ..     126     175 .. 0.94
   4 !  130.2   0.1   1.8e-42   1.8e-42       1     115 []     167     278 ..     167     278 .. 0.98
   5 !   10.8   0.0   1.9e-05   1.9e-05      31      48 ..     268     285 ..     268     287 .] 0.93

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.1e-07
             DM9 55 yeWvpss.dgsvpkgAvegGttedgeplyigrak 87
                      Wv+s+ +  +p+ Av gG+++dg+p+y+gr  
  XP_002061352.2  3 HTWVHSTpYAALPPYAVIGGHDSDGTPIYVGRSF 36
                    579998735788999*****************86 PP

  == domain 2  score: 153.0 bits;  conditional E-value: 1.6e-49
             DM9   1 dsdgspiYvgRakhegdllpgkvvpekgaayvsyggkehekseyevLvakepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiG 95 
                     dsdg+piYvgR +heg+ lp+kv+p+kg+ayv+ygg+eh+k++yevLv    + + Wv s +g +p++Av  Gtt++geply+gr++y++slt+G
  XP_002061352.2  24 DSDGTPIYVGRSFHEGENLPAKVIPSKGCAYVAYGGQEHQKTHYEVLVG---QGFAWVGSGGGAIPPNAVRSGTTRQGEPLYVGRGHYSNSLTVG 115
                     79**********************************************5...78***************************************** PP

             DM9  96 kvhpshkvlyipyggkevsv 115
                     kvhpsh++ly+p+gg+ev++
  XP_002061352.2 116 KVHPSHGCLYVPFGGQEVRI 135
                     *****************985 PP

  == domain 3  score: 34.9 bits;  conditional E-value: 6.6e-13
             DM9  32 vsyggkehekseyevLvakepseyeWvpssdgsvpkgAvegGttedgeply 82 
                     v++gg+e++ ++yevL+   +++  Wvp+s g +p++Av +G+++d +p+y
  XP_002061352.2 126 VPFGGQEVRINTYEVLIY--QRHDTWVPASPGYTPPNAVIAGHDSDRTPIY 174
                     79***************5..67789*************************9 PP

  == domain 4  score: 130.2 bits;  conditional E-value: 1.8e-42
             DM9   1 dsdgspiYvgRakhegdllpgkvvpekgaayvsyggkehekseyevLvakepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiG 95 
                     dsd++piY gRa+heg++lp kvvp+kg+ayv++gg e++k +yevL+      y+Wv+   + +p++Av++G+t++gep+y gr++y+gslt+G
  XP_002061352.2 167 DSDRTPIYAGRAMHEGEMLPSKVVPSKGCAYVCFGGYEFQKPTYEVLTG---YGYVWVRPPPHGIPPNAVTTGRTRSGEPIYYGRGHYQGSLTPG 258
                     7899********************************************5...68***************************************** PP

             DM9  96 kvhpshkvlyipyggkevsv 115
                      +++++++lyipygg+e+++
  XP_002061352.2 259 LISSRQRCLYIPYGGREIRI 278
                     *****************985 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 1.9e-05
             DM9  31 yvsyggkehekseyevLv 48 
                     y++ygg+e++ ++yevL+
  XP_002061352.2 268 YIPYGGREIRIDSYEVLC 285
                     89**************** PP



Or compare XP_002061352.2 to CDD or PaperBLAST