VIMSS10081144 has 649 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-26 77.6 0.0 1.2e-25 76.6 0.0 1.5 1 VIMSS10081144
Domain annotation for each sequence (and alignments):
>> VIMSS10081144
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 76.6 0.0 1.2e-25 1.2e-25 1 154 [. 100 274 .. 100 287 .. 0.89
Alignments for each domain:
== domain 1 score: 76.6 bits; conditional E-value: 1.2e-25
SYMPK_PTA1_N 1 dpavvkrviqaaasiYplvlrlv........aknsndselWekltalKskilsl.ldead..ndgvklaaiKFlervvlvqtkgeisdprrpe... 82
dp+v+ ++i + ++ ++++l+ + ++ + +lW+ + +K++++++ ld ++ +gvk+ a+KF+e+++l+ t++ sdp++ +
VIMSS10081144 100 DPTVAEKSISTGTTFFRSILEKMetqfhhrgKVDRWCVNLWTLMLMFKDAVFNIaLDLEPgrVVGVKVLALKFMETFILLITPH-ASDPEKVStss 194
799********************666555442233788****************888888889*******************99.77777655788 PP
SYMPK_PTA1_N 83 ...endfslskvprnhpllkkqkLeaEAkglldllLkvlqeepiissslvtatln.....slaiiakkRpqlasrilsal 154
++ +++s++ p+l+ L++E +++l +l ++lq+ + i+ +l +a++ sla++a+kRp +++++ls+l
VIMSS10081144 195 egsRQMINISSLAAGLPMLNLTGLMSEVNQTLVRLGSFLQAPTLIQDALPIAVIDcslsfSLAVVARKRPVHYDTVLSVL 274
89999***********************************999999999999999777778*****************98 PP
Or compare VIMSS10081144 to CDD or PaperBLAST