VIMSS10104004 has 1467 amino acids
Query: SYMPK_PTA1_N [M=229] Accession: PF11935.12 Description: Symplekin/PTA1 N-terminal Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.1e-44 135.8 0.0 1.3e-42 132.1 0.0 2.5 2 VIMSS10104004 Domain annotation for each sequence (and alignments): >> VIMSS10104004 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 132.1 0.0 1.3e-42 1.3e-42 2 198 .. 97 290 .. 96 311 .. 0.85 2 ? 0.4 0.1 0.022 0.022 116 171 .. 1112 1167 .. 1104 1192 .. 0.83 Alignments for each domain: == domain 1 score: 132.1 bits; conditional E-value: 1.3e-42 SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvakns......nds..elWekltalKskilsl.ldeadndgvklaaiKFlervvlvqtkgeisdprrpeendfsl 88 pav+++vi + a +++++l+ va + nd + W++l ++K++i+s+ ++ + n gvkl+a+KF+e ++l++t++e + e df++ VIMSS10104004 97 PAVARQVIACGADLFRSTLERVAVQGlhsselNDLleSSWTWLIKFKDEICSVaFK-QGNSGVKLCAMKFVEALILLYTPHEGI------EADFNI 185 89********************7633344566444469***************555.556*******************99444......689*** PP SYMPK_PTA1_N 89 skvprnhpllkkqkLeaEAkglldllLkvlqeep..iissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvek 182 s+++ hp+lk +L EA++ l+llL+ l++ + +++ss +++++nsl+++akkRp+++ ril++lls++pl+ l+ + + + VIMSS10104004 186 SILRGGHPVLKIGDLSIEASQKLGLLLDQLRHPAakSLNSSTIIVLINSLSSVAKKRPAYCGRILPVLLSLDPLSF---------LKGVYAAATNL 272 ******************************87544467788********************************655.........7999******* PP SYMPK_PTA1_N 183 tlkilllnllk..rnass 198 +lk+++l++lk ++a++ VIMSS10104004 273 ALKTVFLSCLKctHPAAA 290 ***********6543333 PP == domain 2 score: 0.4 bits; conditional E-value: 0.022 SYMPK_PTA1_N 116 kvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntppt 171 +++ + ++ +++++ ++ln+l+ + ++ ++l+a+ f +l+ + + +++ VIMSS10104004 1112 TCFAQRQTFTQQVLAGVLNQLVQQIPLPMLFMRTVLQAIGAFPALSDFILEILSRL 1167 57778888999999********99999999************99888766655554 PP
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