VIMSS6576664 has 670 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-51 160.2 1.6 7.6e-51 159.0 0.8 1.9 2 VIMSS6576664
Domain annotation for each sequence (and alignments):
>> VIMSS6576664
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 159.0 0.8 7.6e-51 7.6e-51 2 210 .. 87 292 .. 86 309 .. 0.91
2 ? -1.8 0.0 0.11 0.11 169 209 .. 358 397 .. 350 412 .. 0.67
Alignments for each domain:
== domain 1 score: 159.0 bits; conditional E-value: 7.6e-51
SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvaknsndselWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeisdprrpeendfslskvprnhpll 98
+v k vi ++++iYplv+ + ++++nds++W++lt+lK++i++ +d+++ + + +iKF++ v+l+q +g i dpr +++d+slskvp++hp++
VIMSS6576664 87 EEVKKDVISCSCTIYPLVFLHCCTSPNDSSTWDTLTKLKNEIINDFDKGN-KPLLISCIKFISCVILTQVPG-IRDPRLVTKSDVSLSKVPTHHPFI 181
5799*******************************************877.*********************.*****999**************** PP
SYMPK_PTA1_N 99 kkqkLeaEAkglldllLkvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvektlkilllnllk.r 194
+ + L EA++l++++ ++l++ ++++ +t +ln l +++k+R++la++i+ ll+f+ + + + + +++skl+++++ek+lk+ ll+l k
VIMSS6576664 182 NSNILRIEANDLIEKIFSILFS-DSLNVLYITSVLNILPVLVKRRKELAPKIIGSLLEFHLPNP-KDEIELSNESKLAIRCIEKNLKLILLHLAKsT 276
********************98.589999*******************************7544.566666679*********************75 PP
SYMPK_PTA1_N 195 nassplasriqqalek 210
ass +i+ +l+
VIMSS6576664 277 GASSSSVEKIHAYLSG 292
5667788888888873 PP
== domain 2 score: -1.8 bits; conditional E-value: 0.11
SYMPK_PTA1_N 169 pptlsklqvksvektlkilllnllkrnassplasriqqale 209
p ++ + ve ++ i+l +llk ++ ++++i+ + e
VIMSS6576664 358 PLANFDVTSIPVEVATEIVLTSLLKI-DKNYFHQQINMLRE 397
55556666667888899999999995.33556666665544 PP
Or compare VIMSS6576664 to CDD or PaperBLAST