XP_023093795.1 has 793 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-66 210.8 0.6 3.8e-66 209.1 0.1 2.1 3 XP_023093795.1
Domain annotation for each sequence (and alignments):
>> XP_023093795.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 209.1 0.1 3.8e-66 3.8e-66 1 229 [] 91 357 .. 91 358 .. 0.91
2 ? -2.6 0.0 0.18 0.18 129 157 .. 712 740 .. 706 764 .. 0.80
3 ? -2.0 0.0 0.12 0.12 152 181 .. 753 782 .. 732 784 .. 0.84
Alignments for each domain:
== domain 1 score: 209.1 bits; conditional E-value: 3.8e-66
SYMPK_PTA1_N 1 dpavvkrviqaaasiYplvlrlv...................aknsndselWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeis 76
d+ ++k+++ aaas+Ypl +++++ds++We +ta+K++il+++d+++ +vk+++iKF++rvv+vqt+g +
XP_023093795.1 91 DTVTLKHIVEAAASLYPLKCAGNqfkpahwgivgtdtldncsINHPEDSKVWENMTAIKDDILRRWDTSP-FSVKVCCIKFVQRVVQVQTHG-LT 183
67899************86655588889************999999************************.*********************.77 PP
SYMPK_PTA1_N 77 dprrpe.....................endfslskvprnhpllkkqkLeaEAkglldllLkvlqeepiisss......lvtatlnslaiiakkRp 144
dpr ++ +n++sl++vprnh++l+ + LeaEA+glld+lL+ + p+ ++ lv+atlnslai++++R+
XP_023093795.1 184 DPRVRTgkkempavpkgktvddsqrpeQNETSLAIVPRNHSILSLPYLEAEASGLLDRLLSSIVPCPTNGPVivsdplLVNATLNSLAILIRTRQ 278
766666667777777777777777777**********************************9987664444366679****************** PP
SYMPK_PTA1_N 145 qlasrilsallsfnplkkaqsnntpptlsklqvksvektlkilllnllkrnassplasriqqaleklgrllreiaelleeekkrk 229
++ ++i++a+lsf p+++a+ + tp ++ vks+e+t ++l++n++krn+s+plas++qq++e rl++++ e + +++++k
XP_023093795.1 279 SIGNKIINAILSFVPARQARTPVTPA--VRVGVKSMERTARALMINIMKRNPSHPLASKMQQHIE---RLMQSRIETV-DDSSKK 357
**************************..*************************************...******9999.555554 PP
== domain 2 score: -2.6 bits; conditional E-value: 0.18
SYMPK_PTA1_N 129 vtatlnslaiiakkRpqlasrilsallsf 157
v+ +++sl ++ Rp + + l+a+++
XP_023093795.1 712 VNLCIQSLLYLIMFRPPAREMCLNAVEDV 740
66789999999999999999999999875 PP
== domain 3 score: -2.0 bits; conditional E-value: 0.12
SYMPK_PTA1_N 152 sallsfnplkkaqsnntpptlsklqvksve 181
++l ++ p++ a ++ +p+++s+l + ve
XP_023093795.1 753 KVLARWRPQSTAVQQAQPEQQSTLVNRTVE 782
688999999999999999999999888887 PP
Or compare XP_023093795.1 to CDD or PaperBLAST