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Align A0JN30 to PF11938 (DUF3456)

A0JN30 has 182 amino acids

Query:       DUF3456  [M=150]
Accession:   PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-51  158.3   0.2    1.1e-50  158.1   0.2    1.0  1  A0JN30    


Domain annotation for each sequence (and alignments):
>> A0JN30  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.1   0.2   1.1e-50   1.1e-50       1     150 []      27     171 ..      27     171 .. 0.93

  Alignments for each domain:
  == domain 1  score: 158.1 bits;  conditional E-value: 1.1e-50
  DUF3456   1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskrtlkrlasrkgvkvelgikyelwded 102
              +C+aC+al+dele+++++v+pkk++++g+fr++++g+++  +++ya+Se++ltellee+C++m++Y ++ +++t+++ ++r+  r+g +   + + + ++ d
   A0JN30  27 HCGACRALVDELEWEIARVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGGSS--ELDLQGIRID 126
              6************************************************************************************88555..5566666666 PP

  DUF3456 103 saevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCserskeC 150
               ++++ +lk+aCe++vEeyEde++e++++ ++ +++++kLCs+r+++C
   A0JN30 127 -SDISGTLKFACESIVEEYEDELIEFFSR-EA-DNVKDKLCSKRTDLC 171
              .778899**********************.33.59***********99 PP



Or compare A0JN30 to CDD or PaperBLAST