A0JN30 has 182 amino acids
Query: DUF3456 [M=151]
Accession: PF11938.11
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-48 149.0 0.2 9.2e-48 148.7 0.2 1.0 1 A0JN30
Domain annotation for each sequence (and alignments):
>> A0JN30
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 148.7 0.2 9.2e-48 9.2e-48 1 151 [] 27 171 .. 27 171 .. 0.92
Alignments for each domain:
== domain 1 score: 148.7 bits; conditional E-value: 9.2e-48
DUF3456 1 kCeaCkavadeleealsktdpkkevdvggfrldkkgkrkkkkikyakSElrltellenvCekmldYnlhkerktkkrtlkrlksrakgvkveldikyeawde 102
+C+aC+a++dele++++++dpkk++++g+fr++++g+++ +++ya+SE++ltelle++C++m++Y ++ +++t++++++r+ r +g + + + ++
A0JN30 27 HCGACRALVDELEWEIARVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGR-NGGSS--ELDLQGIRI 125
6***********************************************************************************9.55344..566666666 PP
DUF3456 103 ksaevskelkkaCerlveeyEdeieelykkeqeeeelekkLCeersklC 151
+ +++s +lk+aCe++veeyEde++e++++ + +++++kLC++r++lC
A0JN30 126 D-SDISGTLKFACESIVEEYEDELIEFFSR-EA-DNVKDKLCSKRTDLC 171
6.567799*********************9.33.58***********99 PP
Or compare A0JN30 to CDD or PaperBLAST