NP_001034586.1 has 187 amino acids
Query: DUF3456 [M=151]
Accession: PF11938.11
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-49 154.0 0.0 2.8e-49 153.7 0.0 1.1 1 NP_001034586.1
Domain annotation for each sequence (and alignments):
>> NP_001034586.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 153.7 0.0 2.8e-49 2.8e-49 1 151 [] 31 177 .. 31 177 .. 0.96
Alignments for each domain:
== domain 1 score: 153.7 bits; conditional E-value: 2.8e-49
DUF3456 1 kCeaCkavadeleealsktdpkkevdvggfrldkkgkrkkkkikyakSElrltellenvCekmldYnlhkerktkkrtlkrlksr.akgvkveld 94
+C+aC a+ade+++++s+tdpkk+++vggfrl+++g+ + kk+++a+SE++ltelle+vC++m+dY+l ++++tk++++kr+++r ++g +
NP_001034586.1 31 YCSACMAIADEINYSISQTDPKKMIHVGGFRLKPDGSLTDKKVPLARSETYLTELLEEVCKSMSDYALYENPDTKEKSYKRFAPRdNDG---GNF 122
6************************************************************************************7777...568 PP
DUF3456 95 ikyeawdeksaevskelkkaCerlveeyEdeieelykkeqeeeelekkLCeersklC 151
+++++++ + e s++lk+aCe++vee Ed+i++l+ + ++++++k LC+e+s++C
NP_001034586.1 123 PDFKNFKFDGPESSSALKFACESIVEELEDDIISLFAS--DSDHVAKTLCSEVSDHC 177
9*************************************..3358************9 PP
Or compare NP_001034586.1 to CDD or PaperBLAST