NP_610547.1 has 189 amino acids
Query: DUF3456 [M=151]
Accession: PF11938.11
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-39 121.8 2.1 2.2e-39 121.5 2.1 1.0 1 NP_610547.1
Domain annotation for each sequence (and alignments):
>> NP_610547.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 121.5 2.1 2.2e-39 2.2e-39 1 151 [] 26 172 .. 26 172 .. 0.97
Alignments for each domain:
== domain 1 score: 121.5 bits; conditional E-value: 2.2e-39
DUF3456 1 kCeaCkavadeleealsktdpkkevdvggfrldkkgkrkkkkikyakSElrltellenvCekmldYnlhkerktkkrtlkrlksrakgvkveldikye 98
kC++Ckav++eleea++k+dp+k+ dv+gfrld +g++ +kk+++ kSE++ltel+e++Cekm+dY +++++++k tl ++ + g ++++d +
NP_610547.1 26 KCHVCKAVVTELEEAIAKEDPHKMADVSGFRLDAQGNSISKKVRLVKSEMFLTELMEKICEKMDDYLKATYKSNGKFTLLKMIIN--G-QMNPDSSLV 120
8******************************************************************************999995..6.9******** PP
DUF3456 99 awdeksaevskelkkaCerlveeyEdeieelykkeqeeeelekkLCeersklC 151
++ ++ +++k+l ++C++++e+ ++ ++++ e+ ++l+ k+C+e + +C
NP_610547.1 121 DFVQD-GDLNKSLGHFCNEVLEDNDEIFVKAFQAEELGNDLDIKICSEQASYC 172
****9.9999************************8888***********9999 PP
Or compare NP_610547.1 to CDD or PaperBLAST