SwissProt::A3KNS2 has 276 amino acids
Query: DUF3456 [M=151]
Accession: PF11938.11
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-47 148.1 3.1 1.5e-47 148.1 3.1 2.2 2 SwissProt::A3KNS2
Domain annotation for each sequence (and alignments):
>> SwissProt::A3KNS2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 148.1 3.1 1.5e-47 1.5e-47 1 148 [. 31 187 .. 31 190 .. 0.95
2 ? 0.4 4.3 0.047 0.047 71 103 .. 211 244 .. 198 274 .. 0.49
Alignments for each domain:
== domain 1 score: 148.1 bits; conditional E-value: 1.5e-47
DUF3456 1 kCeaCkavadeleealsktdpkkevdvggfr.ldkkgkrkkkkikyakSElrltellenvCekmldYnlhkerktkkr.......tlkrlks 84
kCe+Ck+v e+++a+++t+++kev+ +++r ld kg iky kS++r++e+ envC+++ +Ynlhker++++r t+ +l++
SwissProt::A3KNS2 31 KCEVCKFVSIEMKSAFDETGKTKEVIDTNYRfLDDKGA---PPIKYVKSDIRFIEVTENVCSRIMQYNLHKERDGSNRfakgmseTFSTLHN 119
8******************************7887775...7************************************************** PP
DUF3456 85 r.akgvkveldikyeawdeksaevskelkkaCerlveeyEdeieelykkeqeeeelekkLCeer.....s 148
+ +kgvkv +di+ye+w+e+saev ++lkk+C+ +ve+yEd+ie++yk +qee +l+++LCe++ +
SwissProt::A3KNS2 120 LvNKGVKVVMDIPYELWNETSAEV-ADLKKQCDVMVEQYEDVIEDWYKGSQEE-DLTTYLCEKHvlkgqD 187
*99*********************.************************9988.********98555444 PP
== domain 2 score: 0.4 bits; conditional E-value: 0.047
DUF3456 71 erktkkrtlkrlksra.kgvkveldikyeawdek 103
++k+kk++ k + + k++kv+++ k++++++
SwissProt::A3KNS2 211 KKKGKKKKGKDGEDGQkKEKKVKKKKKKSKISDS 244
2222222222222222244444444444443322 PP
Or compare SwissProt::A3KNS2 to CDD or PaperBLAST