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Align SwissProt::A3KNS2 to PF11938 (DUF3456)

SwissProt::A3KNS2 has 276 amino acids

Query:       DUF3456  [M=150]
Accession:   PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.2e-46  145.0   3.6    1.2e-46  145.0   3.6    2.4  2  SwissProt::A3KNS2  


Domain annotation for each sequence (and alignments):
>> SwissProt::A3KNS2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.0   3.6   1.2e-46   1.2e-46       1     146 [.      31     181 ..      31     190 .. 0.94
   2 ?   -3.6   7.0      0.71      0.71      22      50 ..     211     239 ..     200     253 .. 0.44

  Alignments for each domain:
  == domain 1  score: 145.0 bits;  conditional E-value: 1.2e-46
            DUF3456   1 kCeaCkaladeleealskvkpkkevdvggfr.ldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskr.......tlkrlas 84 
                        kCe+Ck++  e+++a+++++++kev+ +++r ld kg      iky kS++r++e+ e+vC+++ +Ynlhke+++s+r       t+ +l++
  SwissProt::A3KNS2  31 KCEVCKFVSIEMKSAFDETGKTKEVIDTNYRfLDDKG---APPIKYVKSDIRFIEVTENVCSRIMQYNLHKERDGSNRfakgmseTFSTLHN 119
                        8******************************777777...57*******************************************9999999 PP

            DUF3456  85 r..kgvkvelgikyelwdedsaevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCser 146
                        +  kgvkv ++i+yelw+e+saev ++lkk+C+ +vE+yEd+ie++yk +qee dl+++LC+++
  SwissProt::A3KNS2 120 LvnKGVKVVMDIPYELWNETSAEV-ADLKKQCDVMVEQYEDVIEDWYKGSQEE-DLTTYLCEKH 181
                        999*********************.************************9999.********98 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.71
            DUF3456  22 kkevdvggfrldkkgkrkkkkikyakSel 50 
                        kk+ ++++ +  ++g++k+kk+k++k   
  SwissProt::A3KNS2 211 KKKGKKKKGKDGEDGQKKEKKVKKKKKKS 239
                        22222222222333343444443333332 PP



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