SwissProt::Q8BQ47 has 245 amino acids
Query: DUF3456 [M=151]
Accession: PF11938.11
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8e-50 155.4 0.9 8e-50 155.4 0.9 1.4 2 SwissProt::Q8BQ47
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8BQ47
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.4 0.9 8e-50 8e-50 1 148 [. 43 199 .. 43 202 .. 0.96
2 ? -3.9 0.4 0.95 0.95 120 128 .. 225 233 .. 213 240 .. 0.68
Alignments for each domain:
== domain 1 score: 155.4 bits; conditional E-value: 8e-50
DUF3456 1 kCeaCkavadeleealsktdpkkevdvggfrldkkgkrkkkkikyakSElrltellenvCekmldYnlhkerktkkr.......tlkrlksr 85
kCe+Ck++ el+eals+t++++ev + g+ ld +gkr k++++y+ SE+rl e+len+Ce++ldYn+h+erk++ r t+++lk +
SwissProt::Q8BQ47 43 KCEVCKLLSMELQEALSRTGRSREVLELGQVLD-TGKR-KRHVPYSLSETRLEEALENLCERILDYNVHAERKGSLRyakgqsqTMATLKGL 132
8********************************.7886.9**************************************************** PP
DUF3456 86 .akgvkveldikyeawdeksaevskelkkaCerlveeyEdeieelykkeqeeeelekkLCeer.....s 148
+kgvkv+l+i+ e+wde+s+ev + lkk+Ce+++ee+Ed++ ++y+++qe+ l+++LCe++ +
SwissProt::Q8BQ47 133 vQKGVKVDLGIPLELWDEPSVEV-TFLKKQCETMLEEFEDVVGDWYFHHQEQ-PLQHFLCERHvlpasE 199
99*********************.************************9999.*******998666555 PP
== domain 2 score: -3.9 bits; conditional E-value: 0.95
DUF3456 120 eeyEdeiee 128
ee E+ei++
SwissProt::Q8BQ47 225 EEEEEEITK 233
455555544 PP
Or compare SwissProt::Q8BQ47 to CDD or PaperBLAST