XP_020271947.1 has 300 amino acids
Query: DUF3456 [M=150] Accession: PF11938.12 Description: TLR4 regulator and MIR-interacting MSAP Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.2e-09 22.6 9.9 1.8e-07 17.8 9.9 3.0 1 XP_020271947.1 Domain annotation for each sequence (and alignments): >> XP_020271947.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.8 9.9 1.8e-07 1.8e-07 36 150 .] 56 161 .. 40 161 .. 0.75 Alignments for each domain: == domain 1 score: 17.8 bits; conditional E-value: 1.8e-07 DUF3456 36 gkrkkkkikyakSelrltelleevCekmldYnlhkekktskrtlkrlasrkgvkvel.gikyelwdedsaevnkslkkaCerlvEeyEdeieely 129 +k++ + ++++Se ++e+ e+vC+ l+ke+ + ++ +kg+k+el + e + ++e k++++aC++++ + ++ e++ XP_020271947.1 56 EKKQAQISPKKVSEYQIIEIAENVCN------LKKEEADWILQIDI--VEKGDKLELvEQGTEGL--CNSEC-KTIERACQEIIGYSDTDVAEFV 139 44456677899**************6......55555554433332..23566666632223333..23577.99******************** PP DUF3456 130 kkeqee.edlekkLCserskeC 150 +k++ + ++l++ LC+++s++C XP_020271947.1 140 YKHRPSvDKLANVLCKDLSDAC 161 ********************99 PP
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