VIMSS10078410 has 453 amino acids
Query: DUF3493 [M=73]
Accession: PF11998.12
Description: Low psii accumulation1 / Rep27
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-28 83.8 0.6 6.4e-28 83.1 0.6 1.4 1 VIMSS10078410
Domain annotation for each sequence (and alignments):
>> VIMSS10078410
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.1 0.6 6.4e-28 6.4e-28 2 73 .] 183 260 .. 182 260 .. 0.97
Alignments for each domain:
== domain 1 score: 83.1 bits; conditional E-value: 6.4e-28
DUF3493 2 ekkarLraEakaPfRglRlflYlafaaSaliGalifllrllagr......peleealqnlaiqvgvvalmvfLlrler 73
+++ +L +E++aPfRg+R+f+Y+afaa+a+i+++++++rl+++ p+l e+ n ai++g++++mv+L+ +e+
VIMSS10078410 183 RRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIrggdgaPNLLETTGNAAINIGGIVVMVSLFLWEN 260
5788************************************************************************96 PP
Or compare VIMSS10078410 to CDD or PaperBLAST