PaperBLAST – Find papers about a protein or its homologs

 

Align WP_013289872.1 to PF12010 (DUF3502)

WP_013289872.1 has 500 amino acids

Query:       DUF3502  [M=69]
Accession:   PF12010.12
Description: Domain of unknown function (DUF3502)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-32   96.3   0.4    1.4e-31   95.1   0.1    1.9  2  WP_013289872.1  


Domain annotation for each sequence (and alignments):
>> WP_013289872.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.64      0.64      29      47 ..      69      87 ..      56      90 .. 0.62
   2 !   95.1   0.1   1.4e-31   1.4e-31       3      69 .]     428     494 ..     426     494 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.64
         DUF3502 29 aLltGavDpeetlpkfnek 47
                    ++ + + D+ e+ +k++ k
  WP_013289872.1 69 EIKMTMFDWGEYNDKLQTK 87
                    4455555666666666665 PP

  == domain 2  score: 95.1 bits;  conditional E-value: 1.4e-31
         DUF3502   3 lgFtfDsspvkteiaalsnvveeykkaLltGavDpeetlpkfneklkaaGidkviaElqkQldefla 69 
                     lgF+fD+s+vkt++aa++nv+++y + L+tG+vDp+ ++p+ ++k k aG+d +i+E+qkQ+defl+
  WP_013289872.1 428 LGFNFDDSKVKTQVAACKNVWKQYIPMLETGSVDPDRYIPAAIDKFKRAGVDIIINEAQKQYDEFLK 494
                     8****************************************************************97 PP



Or compare WP_013289872.1 to CDD or PaperBLAST