PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::5mltA to PF12010 (DUF3502)

biolip::5mltA has 454 amino acids

Query:       DUF3502  [M=69]
Accession:   PF12010.12
Description: Domain of unknown function (DUF3502)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.7e-30   89.6   0.3    2.9e-29   87.7   0.3    2.1  1  biolip::5mltA  


Domain annotation for each sequence (and alignments):
>> biolip::5mltA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.7   0.3   2.9e-29   2.9e-29       1      69 []     383     452 ..     383     452 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.7 bits;  conditional E-value: 2.9e-29
        DUF3502   1 palgFtfDsspvkteiaalsnvveeykkaLltGavDpeetlpkfneklkaaG.idkviaElqkQldefla 69 
                    palgF f++++vk+ei+a++n ++++++a++tG+vDp++++p+++eklk+ G ++kv++E+qkQ+defl+
  biolip::5mltA 383 PALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGaYEKVLNEMQKQYDEFLK 452
                    79**************************************************99**************97 PP



Or compare biolip::5mltA to CDD or PaperBLAST