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Align Q9JLM4 to PF12012 (DUF3504)

Q9JLM4 has 1370 amino acids

Query:       DUF3504  [M=162]
Accession:   PF12012.12
Description: Domain of unknown function (DUF3504)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-70  221.2   0.3    8.4e-70  220.2   0.3    1.6  1  Q9JLM4    


Domain annotation for each sequence (and alignments):
>> Q9JLM4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.2   0.3   8.4e-70   8.4e-70       1     161 [.    1186    1352 ..    1186    1353 .. 0.92

  Alignments for each domain:
  == domain 1  score: 220.2 bits;  conditional E-value: 8.4e-70
  DUF3504    1 vvsrveEeeLWeskqLgadsPivLLntllyfntkyfnlrtveehlkLsfsnverqskknpr....eketylrylep...ekkaeakkrkkeeedenkvve 93  
               v+srveEe+LWe+kqLg++sP vLLntl++fntk+f+l+t+eeh++Lsf+nv+rqs+k+++    +k++++ry++p   +k   +   k+++ed ++++e
   Q9JLM4 1186 VFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTprgtTKVVSIRYYAPvrqRKGRDTGPGKRKRED-ETILE 1284
               69*********************************************************9999999**********885333344444554444.79*** PP

  DUF3504   94 qaensenplrCpvkLyelylskcPesvkerkdvFYlqpeksvvpesplWyssqplgkesLesmlkril 161 
               q+en  nplrCpvk+ye+ylskcPes+++r+dvFYlqpe+s+  esplWys  p+++++Lesml+ril
   Q9JLM4 1285 QRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRIL 1352
               *******************************************************************8 PP



Or compare Q9JLM4 to CDD or PaperBLAST