SwissProt::A6NDV4 has 472 amino acids
Query: DUF3522 [M=184]
Accession: PF12036.12
Description: Protein of unknown function (DUF3522)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-57 179.8 11.8 4.8e-57 179.3 11.8 1.2 1 SwissProt::A6NDV4
Domain annotation for each sequence (and alignments):
>> SwissProt::A6NDV4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 179.3 11.8 4.8e-57 4.8e-57 3 184 .] 233 415 .. 231 415 .. 0.96
Alignments for each domain:
== domain 1 score: 179.3 bits; conditional E-value: 4.8e-57
DUF3522 3 llqlllltlSnlaflpaiyvalkrklvfEavvylftmlfSllYHacdspg..vlclekedvlqlseleWhrlDnigsilaiwvtlvaladld 92
ll++lll+lSnl+flp++++a++ ++v Ea vy+ftm+fS++YHacd+pg v+c++++dvlq++ D++gs++++wvt++a+a+l+
SwissProt::A6NDV4 233 LLSTLLLCLSNLMFLPPVVLAIRSRYVLEAAVYTFTMFFSTFYHACDQPGivVFCIMDYDVLQFC-------DFLGSLMSVWVTVIAMARLQ 317
7899*************************************************************.......******************** PP
DUF3522 93 ealksllkylglllvailqekdrwnlantlipilvgllilivvwslr........rrlkklntqkllpgllllalaliffllgldetednyr 176
+++k++l +lg++l+ ++ ++dr +l+n+l+p l++l il+++w++r +++++ ++l pg l++ a+ +l+++ et+dny
SwissProt::A6NDV4 318 PVVKQVLYLLGAMLLSMALQLDRHGLWNLLGPSLFALGILATAWTVRsvrrrhcyPPTWRRWLFYLCPGSLIAGSAV--LLYAFVETRDNYF 407
********************************************66666666666778999****************..************* PP
DUF3522 177 ivHslWHi 184
++Hs+WH+
SwissProt::A6NDV4 408 YIHSIWHM 415
*******7 PP
Or compare SwissProt::A6NDV4 to CDD or PaperBLAST