CharProtDB::CH_088627 has 901 amino acids
Query: DUF3533 [M=378] Accession: PF12051.8 Description: Protein of unknown function (DUF3533) Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.6e-11 28.0 1.0 5.6e-11 28.0 1.0 3.5 3 CharProtDB::CH_088627 Domain annotation for each sequence (and alignments): >> CharProtDB::CH_088627 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.0 1.0 5.6e-11 5.6e-11 17 190 .. 43 211 .. 25 221 .. 0.75 2 ? -0.8 2.8 0.031 0.031 97 173 .. 337 411 .. 287 430 .. 0.67 3 ! 8.2 1.3 5.7e-05 5.7e-05 168 352 .. 669 848 .. 606 874 .. 0.73 Alignments for each domain: == domain 1 score: 28.0 bits; conditional E-value: 5.6e-11 DUF3533 17 wGalyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvkenat 102 + al ++ ++++l+++v +D+ ++ t ++g++v ++++++ w++v+ s++e+ + v +ky++ i+ +++++ CharProtDB::CH_088627 43 IKALWDPYANTSQLPIAVYSADKPasFQDKTINIGDEVLKNLKKNH---QLGWKFVD------SKAELDKGVKSGKYYAGIYLPKDFS 121 457788889999************8867777777777777777666...356****9......9************************ PP DUF3533 103 eklyaal.sangass..ynstelleliy..esgRdattvssyilpaltqleaaalakygsqllqqliqslsntaqaaqlsnallaspi 185 ++l + + + ++++ y+ +e ++ i +++ a++++s+i++ + ++++ l k +++ ++ +++ ++++++++ +l+++ CharProtDB::CH_088627 122 KDLLSFTtGDIKKPQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA---ILSTND 206 ******9655554431155556666665337899999999999998888887777778888888999999999988885...666665 PP DUF3533 186 afnsi 190 ++ +i CharProtDB::CH_088627 207 NLGTI 211 55555 PP == domain 2 score: -0.8 bits; conditional E-value: 0.031 DUF3533 97 vkenateklyaalsangassynstelleliyesgRdattvssyilpaltqleaaala.kygsqllqqliqslsntaqa 173 v +a +k+++al + ++s++ +l++i e +++ ++v ++i +a+ + + + ++ ++ ++l++++i+++ + +a CharProtDB::CH_088627 337 VTLDAAKKMQSAL-PSITNSVQ--ITLQSIQEFSKNTSSVLAVIDQAIADNQLTDEEkEQINSLITNFINNIARQREA 411 4456777777777.22222233..336666666666666666666666555544444244455555555555544444 PP == domain 3 score: 8.2 bits; conditional E-value: 5.7e-05 DUF3533 168 sntaqaaqlsnallaspiafnsidlrPftdgvalaplqvgliyliiltffqfaflgklhaemg..lsrklkfkqllvyrllisvvslf 253 + a++++ ++p++++ + + P+ + + a++ ++ ++++ + + ++ l + + +++ + ++ ++ r+ + v + CharProtDB::CH_088627 669 KLDATKESD---FWTQPVEVQENQVYPIANN-GSASTPFYTALCLWVGAVLLSSLATTEVHLSdkDKKRYSKREQFFARMGSFVAIGL 752 433333332...7889999999999998764.34445589999988888887777777777766555555556666669999999999 PP DUF3533 254 vlSlffslvs.lafqvdftvafGragFvvyWmitwlvmaavglanenvasilgppylpvwllfwvilNvss..tfvPlelspgFYryg 338 +l+++l + ++vd+ ++ ++ l+ +a+ ++ ++++++g+ + +++++++v +s + +P+++s +F++ CharProtDB::CH_088627 753 AQALIVTLGNyFGLGVDV------RDPFYSVLFALLISIAFMIMVYVLVALFGNVGKGIAIIILVL-SISGggGNYPIQVSGKFFQAI 833 999999988878899999......3555556777788888888888999999********999875.5666589************98 PP DUF3533 339 yal.Plhniveilrv 352 P+ +v++lr CharProtDB::CH_088627 834 NPYlPFTHAVNLLRE 848 877799999998886 PP
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