CharProtDB::CH_088627 has 901 amino acids
Query: DUF3533 [M=376] Accession: PF12051.11 Description: Protein of unknown function (DUF3533) Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.6e-11 28.0 1.0 5.6e-11 28.0 1.0 3.4 3 CharProtDB::CH_088627 Domain annotation for each sequence (and alignments): >> CharProtDB::CH_088627 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.0 1.0 5.6e-11 5.6e-11 17 190 .. 43 212 .. 25 221 .. 0.77 2 ? -0.5 1.7 0.027 0.027 99 171 .. 339 408 .. 288 432 .. 0.59 3 ! 4.3 1.0 0.00093 0.00093 163 349 .. 663 847 .. 606 873 .. 0.70 Alignments for each domain: == domain 1 score: 28.0 bits; conditional E-value: 5.6e-11 DUF3533 17 wGalyrrsdrlknlnvlvVneDeg...gselepvvgeavakiiketassslgtwkvinssefkesekeveelvhkekywgalvvkena 101 + al+++ ++++l+++v +D+ +++++++ e +++++k+ + wk+++ s++e+ + v +ky++ ++ ++++ CharProtDB::CH_088627 43 IKALWDPYANTSQLPIAVYSADKPasfQDKTINIGDEVLKNLKKNHQ----LGWKFVD------SKAELDKGVKSGKYYAGIYLPKDF 120 45788888999*************77555555555555554444444....66****8......9*********************** PP DUF3533 102 tealyaalasangass..ynstellelvy..esgrdptnvksyilpiltqleaaalskyskellqslikslsnssqaallallaspla 185 +++l + ++ + ++++ y+ +e ++ + +++ +++++s+i++ + ++++ l k +++ ++ k++ ++++++++ +l+++ + CharProtDB::CH_088627 121 SKDLLSFTTGDIKKPQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA-ILSTNDN 207 ********88877765225555777777544799***********99888888888889999999***********9996.8888777 PP DUF3533 186 fnsiD 190 + +iD CharProtDB::CH_088627 208 LGTID 212 76666 PP == domain 2 score: -0.5 bits; conditional E-value: 0.027 DUF3533 99 enatealyaalasangassynstellelvyesgrdptnvksyilpiltqleaaals.kyskellqslikslsns 171 +a +++++al s ++ s + t l+++ e +++ ++v +i +++ + + + ++ ++ ++l++++i+++ + CharProtDB::CH_088627 339 LDAAKKMQSALPSITN--SVQIT--LQSIQEFSKNTSSVLAVIDQAIADNQLTDEEkEQINSLITNFINNIARQ 408 4555555555522222..22222..4444444444444444444444333322222122233333333333333 PP == domain 3 score: 4.3 bits; conditional E-value: 0.00093 DUF3533 163 slikslsnssqaallallasplafnsiDlrpftdavalaplqvgliyliiltffqlaflgklhaqml...srklkfkqllvyrllisv 247 +++k l+ ++ ++ + ++p++++ + + p+ ++ a++ ++ ++++ + + l+ l + + +++ + ++ ++ r+ + v CharProtDB::CH_088627 663 EIVKLLKLDATKES-DFWTQPVEVQENQVYPIANN-GSASTPFYTALCLWVGAVLLSSLATTEVHLSdkdKKRYSKREQFFARMGSFV 748 44444444444444.37888888888888888654.3334457777777777777666666666665557777777777888888888 PP DUF3533 248 islfvlSLffslvs.lafqvdftvafGragFvvyWmitwlvmlavglanenvasilgppylpvwllfwvilNvst..tfvPlelspgF 332 + +L+++l + ++vd++ f ++ l+ +a+ +++ ++++++g +++++++v +s + +P+++s +F CharProtDB::CH_088627 749 AIGLAQALIVTLGNyFGLGVDVRDPFYSV------LFALLISIAFMIMVYVLVALFGNVGKGIAIIILVL-SISGggGNYPIQVSGKF 829 88888888888888677888885555552......45556666777777788888899999999888775.4555469********** PP DUF3533 333 Yrygyal.Plhniveilr 349 ++ P+ +v++lr CharProtDB::CH_088627 830 FQAINPYlPFTHAVNLLR 847 *98877669888888877 PP
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