CharProtDB::CH_088627 has 901 amino acids
Query: DUF3533 [M=376]
Accession: PF12051.11
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-11 28.0 1.0 5.6e-11 28.0 1.0 3.4 3 CharProtDB::CH_088627
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_088627
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.0 1.0 5.6e-11 5.6e-11 17 190 .. 43 212 .. 25 221 .. 0.77
2 ? -0.5 1.7 0.027 0.027 99 171 .. 339 408 .. 288 432 .. 0.59
3 ! 4.3 1.0 0.00093 0.00093 163 349 .. 663 847 .. 606 873 .. 0.70
Alignments for each domain:
== domain 1 score: 28.0 bits; conditional E-value: 5.6e-11
DUF3533 17 wGalyrrsdrlknlnvlvVneDeg...gselepvvgeavakiiketassslgtwkvinssefkesekeveelvhkekywgalvvkena 101
+ al+++ ++++l+++v +D+ +++++++ e +++++k+ + wk+++ s++e+ + v +ky++ ++ ++++
CharProtDB::CH_088627 43 IKALWDPYANTSQLPIAVYSADKPasfQDKTINIGDEVLKNLKKNHQ----LGWKFVD------SKAELDKGVKSGKYYAGIYLPKDF 120
45788888999*************77555555555555554444444....66****8......9*********************** PP
DUF3533 102 tealyaalasangass..ynstellelvy..esgrdptnvksyilpiltqleaaalskyskellqslikslsnssqaallallaspla 185
+++l + ++ + ++++ y+ +e ++ + +++ +++++s+i++ + ++++ l k +++ ++ k++ ++++++++ +l+++ +
CharProtDB::CH_088627 121 SKDLLSFTTGDIKKPQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA-ILSTNDN 207
********88877765225555777777544799***********99888888888889999999***********9996.8888777 PP
DUF3533 186 fnsiD 190
+ +iD
CharProtDB::CH_088627 208 LGTID 212
76666 PP
== domain 2 score: -0.5 bits; conditional E-value: 0.027
DUF3533 99 enatealyaalasangassynstellelvyesgrdptnvksyilpiltqleaaals.kyskellqslikslsns 171
+a +++++al s ++ s + t l+++ e +++ ++v +i +++ + + + ++ ++ ++l++++i+++ +
CharProtDB::CH_088627 339 LDAAKKMQSALPSITN--SVQIT--LQSIQEFSKNTSSVLAVIDQAIADNQLTDEEkEQINSLITNFINNIARQ 408
4555555555522222..22222..4444444444444444444444333322222122233333333333333 PP
== domain 3 score: 4.3 bits; conditional E-value: 0.00093
DUF3533 163 slikslsnssqaallallasplafnsiDlrpftdavalaplqvgliyliiltffqlaflgklhaqml...srklkfkqllvyrllisv 247
+++k l+ ++ ++ + ++p++++ + + p+ ++ a++ ++ ++++ + + l+ l + + +++ + ++ ++ r+ + v
CharProtDB::CH_088627 663 EIVKLLKLDATKES-DFWTQPVEVQENQVYPIANN-GSASTPFYTALCLWVGAVLLSSLATTEVHLSdkdKKRYSKREQFFARMGSFV 748
44444444444444.37888888888888888654.3334457777777777777666666666665557777777777888888888 PP
DUF3533 248 islfvlSLffslvs.lafqvdftvafGragFvvyWmitwlvmlavglanenvasilgppylpvwllfwvilNvst..tfvPlelspgF 332
+ +L+++l + ++vd++ f ++ l+ +a+ +++ ++++++g +++++++v +s + +P+++s +F
CharProtDB::CH_088627 749 AIGLAQALIVTLGNyFGLGVDVRDPFYSV------LFALLISIAFMIMVYVLVALFGNVGKGIAIIILVL-SISGggGNYPIQVSGKF 829
88888888888888677888885555552......45556666777777788888899999999888775.4555469********** PP
DUF3533 333 Yrygyal.Plhniveilr 349
++ P+ +v++lr
CharProtDB::CH_088627 830 FQAINPYlPFTHAVNLLR 847
*98877669888888877 PP
Or compare CharProtDB::CH_088627 to CDD or PaperBLAST