CharProtDB::CH_088627 has 901 amino acids
Query: DUF3533 [M=378]
Accession: PF12051.8
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-11 28.0 1.0 5.6e-11 28.0 1.0 3.5 3 CharProtDB::CH_088627
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_088627
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.0 1.0 5.6e-11 5.6e-11 17 190 .. 43 211 .. 25 221 .. 0.75
2 ? -0.8 2.8 0.031 0.031 97 173 .. 337 411 .. 287 430 .. 0.67
3 ! 8.2 1.3 5.7e-05 5.7e-05 168 352 .. 669 848 .. 606 874 .. 0.73
Alignments for each domain:
== domain 1 score: 28.0 bits; conditional E-value: 5.6e-11
DUF3533 17 wGalyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvkenat 102
+ al ++ ++++l+++v +D+ ++ t ++g++v ++++++ w++v+ s++e+ + v +ky++ i+ +++++
CharProtDB::CH_088627 43 IKALWDPYANTSQLPIAVYSADKPasFQDKTINIGDEVLKNLKKNH---QLGWKFVD------SKAELDKGVKSGKYYAGIYLPKDFS 121
457788889999************8867777777777777777666...356****9......9************************ PP
DUF3533 103 eklyaal.sangass..ynstelleliy..esgRdattvssyilpaltqleaaalakygsqllqqliqslsntaqaaqlsnallaspi 185
++l + + + ++++ y+ +e ++ i +++ a++++s+i++ + ++++ l k +++ ++ +++ ++++++++ +l+++
CharProtDB::CH_088627 122 KDLLSFTtGDIKKPQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA---ILSTND 206
******9655554431155556666665337899999999999998888887777778888888999999999988885...666665 PP
DUF3533 186 afnsi 190
++ +i
CharProtDB::CH_088627 207 NLGTI 211
55555 PP
== domain 2 score: -0.8 bits; conditional E-value: 0.031
DUF3533 97 vkenateklyaalsangassynstelleliyesgRdattvssyilpaltqleaaala.kygsqllqqliqslsntaqa 173
v +a +k+++al + ++s++ +l++i e +++ ++v ++i +a+ + + + ++ ++ ++l++++i+++ + +a
CharProtDB::CH_088627 337 VTLDAAKKMQSAL-PSITNSVQ--ITLQSIQEFSKNTSSVLAVIDQAIADNQLTDEEkEQINSLITNFINNIARQREA 411
4456777777777.22222233..336666666666666666666666555544444244455555555555544444 PP
== domain 3 score: 8.2 bits; conditional E-value: 5.7e-05
DUF3533 168 sntaqaaqlsnallaspiafnsidlrPftdgvalaplqvgliyliiltffqfaflgklhaemg..lsrklkfkqllvyrllisvvslf 253
+ a++++ ++p++++ + + P+ + + a++ ++ ++++ + + ++ l + + +++ + ++ ++ r+ + v +
CharProtDB::CH_088627 669 KLDATKESD---FWTQPVEVQENQVYPIANN-GSASTPFYTALCLWVGAVLLSSLATTEVHLSdkDKKRYSKREQFFARMGSFVAIGL 752
433333332...7889999999999998764.34445589999988888887777777777766555555556666669999999999 PP
DUF3533 254 vlSlffslvs.lafqvdftvafGragFvvyWmitwlvmaavglanenvasilgppylpvwllfwvilNvss..tfvPlelspgFYryg 338
+l+++l + ++vd+ ++ ++ l+ +a+ ++ ++++++g+ + +++++++v +s + +P+++s +F++
CharProtDB::CH_088627 753 AQALIVTLGNyFGLGVDV------RDPFYSVLFALLISIAFMIMVYVLVALFGNVGKGIAIIILVL-SISGggGNYPIQVSGKFFQAI 833
999999988878899999......3555556777788888888888999999********999875.5666589************98 PP
DUF3533 339 yal.Plhniveilrv 352
P+ +v++lr
CharProtDB::CH_088627 834 NPYlPFTHAVNLLRE 848
877799999998886 PP
Or compare CharProtDB::CH_088627 to CDD or PaperBLAST