PaperBLAST – Find papers about a protein or its homologs

 

Align T0UL74 to PF12051 (DUF3533)

T0UL74 has 901 amino acids

Query:       DUF3533  [M=376]
Accession:   PF12051.11
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-11   28.0   1.0    5.6e-11   28.0   1.0    3.7  4  T0UL74    


Domain annotation for each sequence (and alignments):
>> T0UL74  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   1.0   5.6e-11   5.6e-11      17     190 ..      43     212 ..      25     221 .. 0.77
   2 ?   -2.0   4.4     0.075     0.075     106     176 ..     340     410 ..     335     426 .. 0.50
   3 ?   -3.9   4.4      0.29      0.29      87      87 ..     440     440 ..     381     544 .. 0.42
   4 !    6.2   1.0   0.00024   0.00024     142     349 ..     642     847 ..     605     873 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 5.6e-11
  DUF3533  17 wGalyrrsdrlknlnvlvVneDeg...gselepvvgeavakiiketassslgtwkvinssefkesekeveelvhkekywgalvvkenatealyaalasanga 115
              + al+++  ++++l+++v  +D+    +++++++  e +++++k+ +      wk+++      s++e+ + v  +ky++ ++ +++++++l + ++ + ++
   T0UL74  43 IKALWDPYANTSQLPIAVYSADKPasfQDKTINIGDEVLKNLKKNHQ----LGWKFVD------SKAELDKGVKSGKYYAGIYLPKDFSKDLLSFTTGDIKK 134
              45788888999*************77555555555555554444444....66****8......9*******************************888777 PP

  DUF3533 116 ss..ynstellelvy..esgrdptnvksyilpiltqleaaalskyskellqslikslsnssqaallallasplafnsiD 190
              ++  y+ +e ++ +    +++ +++++s+i++ + ++++  l k  +++  ++ k++ ++++++++ +l+++ ++ +iD
   T0UL74 135 PQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA-ILSTNDNLGTID 212
              65225555777777544799***********99888888888889999999***********9996.888877776666 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.075
  DUF3533 106 yaalasangassynstellelvyesgrdptnvksyilpiltqlea..aalskyskellqslikslsnssqaal 176
               aa+  +++++  + t+ +++  es +d+++ +s i +++++  +  +++s+ ++++ + ++  ++n++q ++
   T0UL74 340 DAAT--KMQQALPSITSSVKVALESIKDFSSDTSTIISTIEKAIDdnQLTSEEKQQINSLITDFVTNINQQRQ 410
              4444..4444444455567777777777777666666666554320022223333333344444444444444 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 0.29
  DUF3533  87 h 87 
              +
   T0UL74 440 N 440
              2 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.00024
  DUF3533 142 lpiltqleaaalskyskellqslikslsnssqaallallasplafnsiDlrpftdavalaplqvgliyliiltffqlaflgklhaqml...srklkfkqllv 240
              ++ +++ ++a+++  ++  l +++k l+  ++ ++ + l++p++++ + + p+ ++   a++ ++ ++++ +  + l+ l  +   +    +++ + ++ ++
   T0UL74 642 KSGIQKAATAIQKGEKEVDLGEIVKLLKLDATKES-DFLTQPVEVQENQVYPIANN-GSASTPFYTALCLWVGAVLLSSLATTEVHLSdkdKKRYSKREQFF 741
              44445555555543333334455555555555555.49999***********9764.334445888888888888877777777666666877888888899 PP

  DUF3533 241 yrllisvislfvlSLffslvs.lafqvdftvafGragFvvyWmitwlvmlavglanenvasilgppylpvwllfwvilNvst..tfvPlelspgFYrygyal 339
               r+ + v   +  +L+++l +   ++vd++  f         ++  l+ +a+ +++ ++++++g    +++++++v   +s   + +P+++s +F++     
   T0UL74 742 ARMGSFVAIGLAQALIVTLGNyFGLGVDVRDPFYSV------LFALLISIAFMIMVYVLVALFGNVGKGIAIIILVL-SISGggGNYPIQVSGKFFQAINPY 836
              999999999999999999998788999996666552......45666666777777788889999999999888775.4555469***********988776 PP

  DUF3533 340 .Plhniveilr 349
               P+  +v++lr
   T0UL74 837 lPFTHAVNLLR 847
              69888888877 PP



Or compare T0UL74 to CDD or PaperBLAST