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Align VIMSS102230 to PF12051 (DUF3533)

VIMSS102230 has 757 amino acids

Query:       DUF3533  [M=376]
Accession:   PF12051.11
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-13   34.6  20.1    4.9e-12   31.5   0.1    3.2  3  VIMSS102230  


Domain annotation for each sequence (and alignments):
>> VIMSS102230  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.1   4.9e-12   4.9e-12       9     180 ..      26     186 ..      17     213 .. 0.71
   2 ?   -4.4   5.9      0.39      0.39     101     173 ..     349     422 ..     326     459 .. 0.58
   3 !   15.5   1.9   3.6e-07   3.6e-07     163     372 ..     539     745 ..     510     749 .. 0.67

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 4.9e-12
      DUF3533   9 ilailsiywGalyrrsdrlknlnvlvVneDeg...gselepvvgeavakiiketassslgtwkvinssefkesekeveelvhkekywgalvvkenate 103
                  +l  ls + G+++++  r+++l+++vVn D+     ++   + ++ v+k+ k+       +++++       s k+ +e + +++y+++++ +e+ ++
  VIMSS102230  26 ALYNLS-FLGSMWDPYGRVNDLPIAVVNHDKPakrADKSLTIGNDMVDKMSKSK----DLEYHFV-------SAKQAQEGLKEGDYYMVITLPEDLSQ 111
                  566677.89***********************7633333344444444443333....4677777.......79999********************* PP

      DUF3533 104 alyaalasangassynst.ellelvyesgrdptnvksyilpiltqleaaalskyskellq..slikslsnssqaallall 180
                  +  ++l+++ ++ + + + +  + +++  + +t++++  ++  ++++++++s++ ++++   s +k++s  sq     +l
  VIMSS102230 112 RAATLLNPEPQKLTIRYQtSKGHGMVAAKMGETAMAKLKESVSQNITKTYTSAVFSSMTDlqSGLKEASAGSQ-----AL 186
                  ******8888887766544667777777777788888777777888888877777777632233333333333.....33 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 0.39
      DUF3533 101 atealyaalasangassynstellel.vyesgrdptnvksyilpiltqleaaalskyskellqslikslsnssq 173
                  at+ +++++a+++g+ +   ++  ++ ++  ++   +  + ++++l++l+++ +sk+ ++l + +++ +++s+q
  VIMSS102230 349 ATSVYQSLTAEQQGELAAALSQSDKSqTVSAAQTILSSVQTLSTSLQSLSQEDQSKQLEQLKEAVAQIANQSNQ 422
                  55555555555555544444433333033333444444444444444444444444444444333333333333 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 3.6e-07
      DUF3533 163 slikslsnssqaalla.llasplafnsiDlrpf.tdavalaplqvgliyliiltffqlaflgklhaqmlsrkl.kfkqllvyrllisvislfvlSLff 257
                  ++ ++ls  s ++++a ++a+pl +n  D   + t+++ +ap  + + ++++    ++ f ++l       ++ + + ++  +++i++    ++S++ 
  VIMSS102230 539 KASQQLSLVSVTDKNAkAVAKPLVLNEKDKDGVkTNGIGMAPYMIAVSLMVVALSTNVIFANSLSGR----PVkDKWDWAKQKFVINGFISTMGSIVL 632
                  4445555555555444799999999999999874678899996666666666666666666665544....4536899******************** PP

      DUF3533 258 slvslafqvdftvafGragFvvyWmitwlvmlavglanenvasil......gppylpvwllfwvilNvsttfvPlelspgFYrygyal.Plhniveil 348
                   l++ +++ ++  ++G   +  + ++ w +m++v          l      + ++ ++++l++  +  s + +P+els +F++ ++ + P+ ++v +l
  VIMSS102230 633 YLAIQLLGFEA--RYGMETLGFIMLSGWTFMALVT--------ALvgwddrYGSFASLVMLLL-QVGSSGGSYPIELSGAFFQKLHPFlPMTYVVSGL 719
                  ****9999888..5555433333344444444432........22244233333333333332.2345669*************************99 PP

      DUF3533 349 rvI..ffdtskgqlgrnlGiLfaWvv 372
                  r+   +++   ++     G L+a++v
  VIMSS102230 720 RQTisLSGHIGVEVKVLTGFLLAFMV 745
                  97524444444556666666666655 PP



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