VIMSS102230 has 757 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-12 31.7 17.6 5.2e-11 28.1 0.1 3.2 3 VIMSS102230
Domain annotation for each sequence (and alignments):
>> VIMSS102230
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.1 0.1 5.2e-11 5.2e-11 10 171 .. 27 182 .. 17 214 .. 0.69
2 ? -4.0 4.9 0.28 0.28 104 173 .. 352 422 .. 329 457 .. 0.53
3 ! 14.6 1.3 6.6e-07 6.6e-07 161 376 .. 537 745 .. 514 749 .. 0.71
Alignments for each domain:
== domain 1 score: 28.1 bits; conditional E-value: 5.2e-11
DUF3533 10 lailsiywGalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenateal 105
l ls + G++++ r+++l+++vVn D+ + + +g+ + d +++ k +++++ + ++ +e + + +y+++++ +e+ +++
VIMSS102230 27 LYNLS-FLGSMWDPYGRVNDLPIAVVNHDKPakRADKSLTIGNDMVDKMSKSK---DLEYHFV-------SAKQAQEGLKEGDYYMVITLPEDLSQRA 113
56677.89***********************7644444455555444444444...3666666.......799999********************** PP
DUF3533 106 yaalasangassynst.dllelvyesgrdptnvksyilpilqaleaaalakyssellq..slikslsns 171
++l+++ ++ + + + + + +++ + +t++++ ++ q++++++++++ s+++ s +k++s
VIMSS102230 114 ATLLNPEPQKLTIRYQtSKGHGMVAAKMGETAMAKLKESVSQNITKTYTSAVFSSMTDlqSGLKEASAG 182
****77777765554435556666666666666666666666666666666666555222333333333 PP
== domain 2 score: -4.0 bits; conditional E-value: 0.28
DUF3533 104 alyaalasangassynstdll.elvyesgrdptnvksyilpilqaleaaalakyssellqslikslsnssq 173
+++++a+++g+ + ++ + ++ ++ + + ++++lq+l+++ ++k+ ++l + +++ +++s+q
VIMSS102230 352 VYQSLTAEQQGELAAALSQSDkSQTVSAAQTILSSVQTLSTSLQSLSQEDQSKQLEQLKEAVAQIANQSNQ 422
44444444444333333322202223333333333333444444444444444333333333333333333 PP
== domain 3 score: 14.6 bits; conditional E-value: 6.6e-07
DUF3533 161 lqslikslsnssqaallanllasplafnsiDlrPf.tdavllaplqvgliyliiltffqlallgklhaqmasrklkfkqllvyRllisvislfvlSLf 257
l ++ ++ls s ++++a+++a+pl +n D + t+++ +ap + + ++++ ++ + ++l + + ++ +++i++ ++S++
VIMSS102230 537 LAKASQQLSLVSVTDKNAKAVAKPLVLNEKDKDGVkTNGIGMAPYMIAVSLMVVALSTNVIFANSLSGRP---VKDKWDWAKQKFVINGFISTMGSIV 631
446677777777777777799**********998746889999977777777777777777777766555...3368999****************** PP
DUF3533 258 fslvslafqvdftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsp..tfvPlelspgFYryGyal.Plhniveil 352
l++ +++ ++ + y+m t +++++g + +++ lv +y +f+ l++ l v + + +P+els +F++ ++ + P+ ++v +l
VIMSS102230 632 LYLAIQLLGFEA--R--------YGMETLGFIMLSGWTFMALVTALVGWDDRYGSFASLVMLLLQVGSsgGSYPIELSGAFFQKLHPFlPMTYVVSGL 719
**9999998888..4........444444444445544444444454555555555555555555544349****************99******999 PP
DUF3533 353 kvI..ffdtskgqlgrnlGiLfaWvv 376
++ +++ ++ + G L+a++v
VIMSS102230 720 RQTisLSGHIGVEVKVLTGFLLAFMV 745
87524444444555555566666555 PP
Or compare VIMSS102230 to CDD or PaperBLAST