VIMSS102230 has 757 amino acids
Query: DUF3533 [M=378]
Accession: PF12051.8
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-15 43.1 6.0 5.6e-13 34.6 0.2 3.2 3 VIMSS102230
Domain annotation for each sequence (and alignments):
>> VIMSS102230
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.6 0.2 5.6e-13 5.6e-13 10 183 .. 27 188 .. 16 218 .. 0.68
2 ? -4.3 5.8 0.36 0.36 126 173 .. 376 423 .. 324 464 .. 0.55
3 ! 19.7 1.3 1.9e-08 1.9e-08 162 374 .. 539 745 .. 508 749 .. 0.72
Alignments for each domain:
== domain 1 score: 34.6 bits; conditional E-value: 5.6e-13
DUF3533 10 lailslywGalyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvkenatekl 105
l ls + G++ ++ r+++l+++vVn D+ + + +g+ + + +++ + ++++v s ++ +e + +++y+++i+ +e+ +++
VIMSS102230 27 LYNLS-FLGSMWDPYGRVNDLPIAVVNHDKPakRADKSLTIGNDMVDKMSKSK---DLEYHFV-------SAKQAQEGLKEGDYYMVITLPEDLSQRA 113
55677.99***********************7633444444444444333333...4666666.......799************************* PP
DUF3533 106 yaal.sangassynstelleliyesgRdattvssyi.lpaltqleaaalakygsqllqqliqslsntaqaaqlsna...llas 183
++l ++ + l++ y++++ + v++ +a+ +l++ + +++++++++ + +s+++ + + ++a +las
VIMSS102230 114 ATLLnPEPQ--------KLTIRYQTSKGHGMVAAKMgETAMAKLKESVSQNITKTYTSAVFSSMTDLQSGLKEASAgsqALAS 188
****44444........466666666666665555413344455555555666666666666666655555544334444444 PP
== domain 2 score: -4.3 bits; conditional E-value: 0.36
DUF3533 126 iyesgRdattvssyilpaltqleaaalakygsqllqqliqslsntaqa 173
++ ++ + + ++++l++l+++ ++k+ +ql + ++q +++++qa
VIMSS102230 376 TVSAAQTILSSVQTLSTSLQSLSQEDQSKQLEQLKEAVAQIANQSNQA 423
222233333333334444444444444444444443333333333333 PP
== domain 3 score: 19.7 bits; conditional E-value: 1.9e-08
DUF3533 162 qliqslsntaqaaqlsna..llaspiafnsidlrPf.tdgvalaplqvgliyliiltffqfaflgklhaemglsrkl.kfkqllvyrllisvvslfvl 255
++ q+ls + +++ + ++a+p+ +n d + t+g+++ap + + ++++ ++ f ++l + + ++ +++i++ ++
VIMSS102230 539 KASQQLSLVSVTDK---NakAVAKPLVLNEKDKDGVkTNGIGMAPYMIAVSLMVVALSTNVIFANSLSGRP-----VkDKWDWAKQKFVINGFISTMG 628
33444444444444...346999999999999998746889999966666666666666666666665544.....437899999************* PP
DUF3533 256 SlffslvslafqvdftvafGragFvvyWmitwlvmaavglanenvasil...gppylpvwllfwvilNvss..tfvPlelspgFYrygyal.Plhniv 347
S++ l++ +++ ++ r y+m t +++++g + + ++++l +y +++ l+ l v s + +P+els +F++ ++ + P+ ++v
VIMSS102230 629 SIVLYLAIQLLGFEA-----R-----YGMETLGFIMLSGWTFMALVTALvgwDDRYGSFASLVMLLLQVGSsgGSYPIELSGAFFQKLHPFlPMTYVV 716
**********99999.....4.....788888888888888888777777885666666666666666655569************************ PP
DUF3533 348 eilrvI..ffdtakgqlgrnlgiLlawvv 374
+lr+ +++ ++ g Lla++v
VIMSS102230 717 SGLRQTisLSGHIGVEVKVLTGFLLAFMV 745
***97635555555555555555555555 PP
Or compare VIMSS102230 to CDD or PaperBLAST