VIMSS104788 has 993 amino acids
Query: DUF3533 [M=380] Accession: PF12051.12 Description: Protein of unknown function (DUF3533) Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.4e-09 22.6 0.6 2.4e-09 22.6 0.6 3.5 3 VIMSS104788 Domain annotation for each sequence (and alignments): >> VIMSS104788 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.6 0.6 2.4e-09 2.4e-09 20 163 .. 43 179 .. 24 213 .. 0.71 2 ? -3.3 0.4 0.18 0.18 163 178 .. 608 623 .. 557 692 .. 0.57 3 ? -0.2 3.7 0.021 0.021 283 339 .. 867 924 .. 732 957 .. 0.56 Alignments for each domain: == domain 1 score: 22.6 bits; conditional E-value: 2.4e-09 DUF3533 20 lykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenatealyaalasa..n 113 +++ ++ ++v+vVneD+g +++ + vg+++ + l+++k +w+++ ++e+ +++ ky++ ++++ +t +++ l ++ + VIMSS104788 43 MWDPYGNTGHIKVAVVNEDKGdtIRGKKVNVGNTMVNTLKKNK---SFDWQFV-------SREKADHEIKMGKYFAGIYIPSKFTHEITGTLRKQpqK 130 66666777889**********8877777777877777777776...4899999.......699999************************99654114 PP DUF3533 114 gassynstdllelvyesgrdptnvksyilpilqaleaaalakyssellqs 163 +++++ ++ ++ v + d t + +++++ +++++++++++ +e + VIMSS104788 131 ADVEFKVNQKINAVASKLTD-TGSSVVVEKANEQFNKTVTRALLEEANKA 179 55667777777777766666.55566666666666666666555554442 PP == domain 2 score: -3.3 bits; conditional E-value: 0.18 DUF3533 163 slikslsnssqaalla 178 +++++l++++q+ ++ VIMSS104788 608 NVQSKLNTIDQVINSG 623 3333333333333322 PP == domain 3 score: -0.2 bits; conditional E-value: 0.021 DUF3533 283 mitwlvmlavglanenvasilvavgppylpfwllfwvi.lNvsptfvPlelspgFYry 339 ++ ++++ ++++n +v + + g p +++++++v ++ +++P++ p+F++ VIMSS104788 867 LFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLqIAGGGGTFPIQTTPQFFQN 924 3455666667777777777776667777777666555324445589999999999985 PP
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