VIMSS1100263 has 915 amino acids
Query: DUF3533 [M=378]
Accession: PF12051.8
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-13 35.9 17.4 1.4e-12 33.2 1.6 3.3 4 VIMSS1100263
Domain annotation for each sequence (and alignments):
>> VIMSS1100263
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 33.2 1.6 1.4e-12 1.4e-12 8 170 .. 27 180 .. 20 232 .. 0.76
2 ? -2.3 1.0 0.086 0.086 134 175 .. 389 410 .. 313 448 .. 0.59
3 ? -3.1 0.3 0.16 0.16 41 62 .. 526 547 .. 481 580 .. 0.52
4 ! 17.1 8.3 1.2e-07 1.2e-07 144 376 .. 659 886 .. 652 888 .. 0.69
Alignments for each domain:
== domain 1 score: 33.2 bits; conditional E-value: 1.4e-12
DUF3533 8 lilailsly....wGalyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvk 98
+ i sly + al ++ +++++l+v+v +D+ + + + ++g+++ ++++++ + w++ + s++++ e v ++ky++ i+v+
VIMSS1100263 27 ALIIIPSLYawfnIWALWDPYSKTQDLKVAVYSADQSvtVAKKKVAIGDELIDQLKKND---KLGWQFTS------SKKQLDEGVKTGKYYAGIYVP 114
4444444443222358899999***************8878888888888888777776...35598887......9******************** PP
DUF3533 99 enateklyaal.sangassynstelleliyesgRdattvssyilpa.ltqleaaalakygsqllqqliqslsnt 170
+n++++l + + + + ++t +iy s+ + ++++ i++a +t+l+++ +++++++ ++l++sl++
VIMSS1100263 115 KNFSKDLISFVdGKIQ----KPT----IIYSSNDKINAIAPKITSAgATTLQSTISEELVQTVAKTLMSSLNKA 180
***********33333....345....88888888887777776643677777777788888887777777754 PP
== domain 2 score: -2.3 bits; conditional E-value: 0.086
DUF3533 134 ttvssyilpaltqleaaalakygsqllqqliqslsntaqaaq 175
+ ++++++++l+ql+a + q
VIMSS1100263 389 QELKAALKTNLEQLSAHTAT--------------------LQ 410
33333333333333333322....................22 PP
== domain 3 score: -3.1 bits; conditional E-value: 0.16
DUF3533 41 gseltpvvgeavaqainettss 62
++++ +v + + +++++t+++
VIMSS1100263 526 LNQINTAVLPKLPSLLTNTQKT 547
3333334444444444444433 PP
== domain 4 score: 17.1 bits; conditional E-value: 1.2e-07
DUF3533 144 ltqleaaalakygsqllqqliqslsntaqaaqlsnallaspiafnsidlrPftd.gvalaplqvgliyliiltffqfaflgklhaemg..lsrklkf 237
+++ ++a ++++ + l++li+ l a+++++ la+p++++s + P++ g+a ap ++ ++++ + ++ + ++ ++ ++++ +
VIMSS1100263 659 IQKGAEAIRKQQKTVDLKDLIKLLRRDATKESN---FLAEPVKLQSKHVYPIKTyGSASAP--FYTALCLWVGALLLSNIVLTNFSLDdkQKERYSK 750
666677777777777777778777777777664...9999999999999998651455555..8888888887777666666666664433444444 PP
DUF3533 238 kqllvyrllisvvslfvlSlffslvslafqvdftvafGragFvvyWmitwlvmaavglanenvasilgppylpvwllfwvilNvss..tfvPlelsp 332
kq ++ r+l +v ++f+ l +f +++ + ++v + ++ ++ +++ + ++a+++g+ + +++++++v +s + +P +ls
VIMSS1100263 751 KQQFIARWLTYIVIGVAQAVFVAL-GNIFLIKA---YIV-SPVALLLLAVFLSMVFMTIVYVLAAMFGNVGKGLAMIILVL-SISGggGNFPVVLSD 841
444444555544444333333332.23333333...444.344444444444444555566777778**********9875.5665589******** PP
DUF3533 333 gFYrygyal.PlhniveilrvIffdtakgqlgrnlgiLlawvvvn 376
+F+++ l P+ + v++lr ++++++l +n+ iL+++ vv
VIMSS1100263 842 KFFQFINPLlPFTYGVNLLREPTGGIYAPNLWHNFIILAIYAVVF 886
*****************************************9986 PP
Or compare VIMSS1100263 to CDD or PaperBLAST