VIMSS2127107 has 799 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-13 34.8 0.3 4.7e-13 34.8 0.3 3.8 4 VIMSS2127107
Domain annotation for each sequence (and alignments):
>> VIMSS2127107
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.8 0.3 4.7e-13 4.7e-13 4 172 .. 21 174 .. 15 213 .. 0.74
2 ? -2.1 2.7 0.078 0.078 139 180 .. 276 318 .. 252 390 .. 0.57
3 ? -1.7 0.1 0.061 0.061 135 206 .. 453 526 .. 445 528 .. 0.73
4 ! 12.5 2.6 3e-06 3e-06 282 353 .. 688 762 .. 553 790 .. 0.76
Alignments for each domain:
== domain 1 score: 34.8 bits; conditional E-value: 4.7e-13
DUF3533 4 llavlilailsiywGalykrsdrlknlnvlvVneDeg...gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvv 97
la++ + i+ G++++ +l++l+v+vVn D+ +++ ++ + d+++e+k+s+ +++++ ++++ e + k +y+++++
VIMSS2127107 21 ALALVPAIYNYIFLGSMWDPYGKLNDLPVAVVNLDKTselNGKKFKLGD----DVITEMKKSKDLDYHFV-------SKDKASEGIKKGDYYMVITF 106
4555555566799************************554444444444....55555555555777777.......69999*************** PP
DUF3533 98 kenatealyaalasangassynstdllelvyesgrdptnvksyil.pilqaleaaalakyssellqslikslsnss 172
+en++e+ ++++ n+++ ++++l y++ r + ++s + +++++l++++ +++++++++++ ++l + +
VIMSS2127107 107 PENFSENATTLM---NKEP-----KTVQLDYQTTRGHNYISSKMSeSAMNQLKSEVSKNITQTYTKEIFAKLGDMK 174
************...3332.....3567777777777766665551456777888888888888887777765544 PP
== domain 2 score: -2.1 bits; conditional E-value: 0.078
DUF3533 139 syilpilqaleaaala.kyssellqslikslsnssqaallanl 180
s+i+++++a+++ l ++ se l++++++++ s++ +++ ++
VIMSS2127107 276 SQISQSTEAVSQLQLGvQQLSEGLSQMAQKTTLSETQQQNISA 318
3333333333333333333333333333333332222221111 PP
== domain 3 score: -1.7 bits; conditional E-value: 0.061
DUF3533 135 tnvksyilpilqaleaaala..kyssellqslikslsnssqaallanllasplafnsiDlrPftdavllaplqv 206
++++s+ilp +++l++ ++ ++ ++ q+l + +++ ++ an+ a++la +s Dl+ t + + +++q+
VIMSS2127107 453 SSLNSQILPGMNKLDSGLTTfnSQLTSGGQKLSSGFTQYADGVAKANAGAQQLASKSKDLQSGTMQLVSGLTQL 526
67899999999999987665223344445566666666665555567999999999999999888888887776 PP
== domain 4 score: 12.5 bits; conditional E-value: 3e-06
DUF3533 282 WmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsp..tfvPlelspgFYryGyal.Plhniveilk 353
W + lv+l++ +a + +++++ ++ f++++ +l +++ +++Pl+l+p+ Y++ + P+ + +++l+
VIMSS2127107 688 WWEMLLVVLLISFAYMAINTFFLTALGKVGEFVMIVVLVLQLATsaGTYPLQLAPKIYQVISPWlPMTYGLKMLR 762
555566666666666666666666677777888888888766654499*************9999*999888877 PP
Or compare VIMSS2127107 to CDD or PaperBLAST