VIMSS4041609 has 927 amino acids
Query: DUF3533 [M=376]
Accession: PF12051.11
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-13 35.5 0.0 3e-13 35.5 0.0 3.0 3 VIMSS4041609
Domain annotation for each sequence (and alignments):
>> VIMSS4041609
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.5 0.0 3e-13 3e-13 4 170 .. 23 174 .. 16 186 .. 0.79
2 ? -4.4 9.2 0.39 0.39 164 347 .. 688 866 .. 678 872 .. 0.69
3 ? -0.6 0.1 0.027 0.027 200 236 .. 875 908 .. 868 911 .. 0.81
Alignments for each domain:
== domain 1 score: 35.5 bits; conditional E-value: 3e-13
DUF3533 4 llavlilailsiywGalyrrsdrlknlnvlvVneDeg..gselepvvgeavakiiketassslgtwkvinssefkesekeveelvhkekywgalvvk 98
++ ++ l++ s++ +++++ ++ +l+v+vVn D+ +++++ vg+++ + +k+++ +w++ s++e e+ + ++ky+++++++
VIMSS4041609 23 VILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPvdYNGQTMDVGDQLVTKLKSNK---ELDWNFL-------SKEEAEQGLKDGKYYMVVTIP 109
3334446677888888889999***************8855555555555544444444...589***9.......699****************** PP
DUF3533 99 enatealyaalasangassynstellelvyesgrdptnvksyilpi.ltqleaaalskyskellqslikslsn 170
++++++ + l ++++ + +el y+++ + + + ++++++ ++ql++++ ++++k++ + + ++++
VIMSS4041609 110 KDFSKNAASVL---DKDP-----KKMELSYKTNGSLNYLGQVVSEQgAKQLKSEVSAEVTKSYAEAIFDKIKE 174
***********...3332.....468999******99999999876488899999999999999888877765 PP
== domain 2 score: -4.4 bits; conditional E-value: 0.39
DUF3533 164 likslsnssqaalla.llasplafnsiDlrpftd.avalaplqvgliyliiltffqlaflgklhaqmlsrklkfkqllvyrllisvislfvlSLffs 258
+++++++++++++ ++a p +++ +++ +++ + alap +l + + + ++f+++++ + ++++++l + +++ ++L
VIMSS4041609 688 GAQQVKDTKATDKTFnMIAAPTKLAHNEYTHVSNyGHALAPY--VLSLALYVGALVFNFIMPIRRVS-MEGQPAYKWWLSKLSLGFVAAVAMALLEG 781
556666666666644677777777777777666523444553..34444445556666677776655.45555667777777777777777777777 PP
DUF3533 259 lvslafqvdftvafGragFvvyWmitwlvmlavglanenvasil..gppylpvwllfwvilNvsttfvPlelspgFYrygyal.Plhnivei 347
++ +a++ + v + + +++la +++ +a+ + + ++++++ll v l+ s +++P+ l F+ + + P+ +++ +
VIMSS4041609 782 GIMIALGLRP------DSIVEFFGTAIITALAYMFLIMLLAMTFdnPGRFIAMVLL-IVQLAGSGGTFPMPLTGWFFNLIHPFlPMTYSIYA 866
7777777777......5677777788899999999999999***766667777665.47799999*************99999999876655 PP
== domain 3 score: -0.6 bits; conditional E-value: 0.027
DUF3533 200 laplqvgliyliiltffqlaflgklhaqmlsrklkfk 236
++p +v+ + ++ilt++ +a++g l+ +m ++lk +
VIMSS4041609 875 MGP-NVYSMSMLILTIIMIACVGLLYLSM--SHLKKR 908
455.7899999***************999..666665 PP
Or compare VIMSS4041609 to CDD or PaperBLAST