VIMSS4041609 has 927 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.5e-12 31.3 0.0 5.5e-12 31.3 0.0 3.0 3 VIMSS4041609
Domain annotation for each sequence (and alignments):
>> VIMSS4041609
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.3 0.0 5.5e-12 5.5e-12 4 170 .. 23 174 .. 15 185 .. 0.77
2 ? -4.5 7.9 0.41 0.41 163 349 .. 687 864 .. 676 871 .. 0.73
3 ? -0.5 0.2 0.025 0.025 203 237 .. 877 908 .. 868 911 .. 0.82
Alignments for each domain:
== domain 1 score: 31.3 bits; conditional E-value: 5.5e-12
DUF3533 4 llavlilailsiywGalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvk 98
++ ++ l + s++ ++++ ++ +l+v+vVn D+ +++++ vg+++ + l+++k +w++ ++ee e+ + + ky+++++++
VIMSS4041609 23 VILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPvdYNGQTMDVGDQLVTKLKSNK---ELDWNFL-------SKEEAEQGLKDGKYYMVVTIP 109
2222334455566666667789***************8866666666665555555555...5899999.......6999***************** PP
DUF3533 99 enatealyaalasangassynstdllelvyesgrdptnvksyilpi.lqaleaaalakyssellqslikslsn 170
++++++ + l ++++ + +el y+++ + + + ++++++ +++l++++ a++++++ + + ++++
VIMSS4041609 110 KDFSKNAASVL---DKDP-----KKMELSYKTNGSLNYLGQVVSEQgAKQLKSEVSAEVTKSYAEAIFDKIKE 174
***********...3332.....46899999999999999999876478899999999999999888887765 PP
== domain 2 score: -4.5 bits; conditional E-value: 0.41
DUF3533 163 slikslsnssqaallanllasplafnsiDlrPftd.avllaplqvgliyliiltffqlallgklhaqmasrklkfkqllvyRllisvislfvlSLff 258
+ +++++++++++++ n++a p +++ +++ +++ + +lap ++ + + + ++++++++ + ++++ +l + +++ ++L
VIMSS4041609 687 DGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNyGHALAPYVLS--LALYVGALVFNFIMPIRRVS-MEGQPAYKWWLSKLSLGFVAAVAMALLE 780
5678888888888888888888888888888887624556664444..44455666677777777666.5666677788888888888888888888 PP
DUF3533 259 slvslafqvdftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.Plhniv 349
++ +a++ + v + + +++la +++ +a+ + + ++++++ll v l+ s +++P+ l F+ + + P+ +++
VIMSS4041609 781 GGIMIALGLRP------DSIVEFFGTAIITALAYMFLIMLLAMTF-DNPGRFIAMVLL-IVQLAGSGGTFPMPLTGWFFNLIHPFlPMTYSI 864
88888887777......4567777778888888888888888888.666677777766.478899999999999999999988888887655 PP
== domain 3 score: -0.5 bits; conditional E-value: 0.025
DUF3533 203 plqvgliyliiltffqlallgklhaqmasrklkfk 237
p +v+ + ++ilt++ +a++g l+ +m ++lk +
VIMSS4041609 877 P-NVYSMSMLILTIIMIACVGLLYLSM--SHLKKR 908
4.7889999***************999..677766 PP
Or compare VIMSS4041609 to CDD or PaperBLAST