PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011014501.1 to PF12051 (DUF3533)

WP_011014501.1 has 619 amino acids

Query:       DUF3533  [M=380]
Accession:   PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-13   36.3  10.6    1.8e-11   29.6   0.0    2.2  2  WP_011014501.1  


Domain annotation for each sequence (and alignments):
>> WP_011014501.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   1.8e-11   1.8e-11       2     165 ..      26     169 ..      23     202 .. 0.69
   2 !    3.3  12.1    0.0018    0.0018     276     359 ..     489     572 ..     424     597 .. 0.74

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 1.8e-11
         DUF3533   2 llllavlilailsiywGalykrsdrlknlnvlvVneDeggselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalv 96 
                     ++ll +l+ +++   + a+y+    l++l+v+vVn+Deg      + ++ v+++l++        +k+i+      + ee +e +++  y++ + 
  WP_011014501.1  26 VMLLPLLFGGVF---VSAYYDPIGGLSKLPVAVVNQDEG---ELDAGAQVVENLLEQDD------IKFIE-----VSAEEAREGINDGTYYFGIE 103
                     445555555555...59**********************...88889999999998888......34443.....3799**************** PP

         DUF3533  97 vkenatealyaalasangassynstdllelvyesgrdp.tnv..ksyilpilqaleaaalakyssellqsli 165
                     +++n+++ + + ++++   +      +++ v++++  +  ++  ++++++ ++++++++   +++++l  + 
  WP_011014501.1 104 IPKNFSDSIASVTSDSPAPA------TVNAVFNNSNGFiASMlgNQVVNTVVETMDTEFGVRIVDNMLVGFS 169
                     *********99993322222......2333333333321222235666666666666666666666665555 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0018
         DUF3533 276 agFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.PlhniveilkvIffdt 359
                     a+ + +Wm+++ + ++++ ++ ++  +      ++l+++++++  +  s +++P e  p+F+ + +   P+ ++v+++++ +f+ 
  WP_011014501.1 489 AHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLV-SSGGLYPPETQPAFFHWFHTYdPITYAVNLVRQMIFNE 572
                     5555689999999999999999999999555666777777777655.4679****************************998774 PP



Or compare WP_011014501.1 to CDD or PaperBLAST