VIMSS1243942 has 551 amino acids
Query: DUF3573 [M=383]
Accession: PF12097.12
Description: Protein of unknown function (DUF3573)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-168 546.6 20.7 1.4e-168 546.6 20.7 1.4 2 VIMSS1243942
Domain annotation for each sequence (and alignments):
>> VIMSS1243942
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 546.6 20.7 1.4e-168 1.4e-168 3 364 .. 6 403 .. 4 415 .. 0.98
2 ? -2.9 0.3 0.13 0.13 190 198 .. 454 462 .. 429 506 .. 0.48
Alignments for each domain:
== domain 1 score: 546.6 bits; conditional E-value: 1.4e-168
DUF3573 3 kkkllivisllvlsilayseds..........................asyaesneqisksnlidkelilklqkqikelqaeinhlketkns..... 68
kk++liv+sll++s+layseds as+a+s++q+++snl+d+el+lklq+q+++lq+++++lk+++n+
VIMSS1243942 6 KKTCLIVSSLLACSGLAYSEDSpqvvsqggplgatsigdqnlgqpdpnASGASSTTQTTGSNLNDRELLLKLQQQVQQLQGQLQQLKAQGNGgglqn 102
8******************************************************************************************99**** PP
DUF3573 69 ..nesaqfttysskvedsklprslldnkeskvlstv...qklsvdiltnidaessiinladkplGgifnkdGgidvGgapaittqGqvtylGsysGn 160
n+s+qfttysskv+++k+pr+l++n+esk+ls++ +++s+di++n++a++siinla++plGg+fn++GgidvGgapaittqGqvtylGsysGn
VIMSS1243942 103 tsNGSSQFTTYSSKVDGNKNPRTLGGNGESKDLSQAligGQTSSDIMGNVNASNSIINLASEPLGGVFNQKGGIDVGGAPAITTQGQVTYLGSYSGN 199
***********************************99999********************************************************* PP
DUF3573 161 nsipiGmissnlfastvlgqrekfddysiflGGlieadaqawfGssvikvnkatslasnGqniyltaanlyflsnlGhyvtaefefdtselnnfslG 257
nsipiG+issnlfast+lgqrekfddys+f+GG+ieadaqawfGs+v+k + a++l snGqniylt+anlyflsnlGhyvta+f+fdt+e+++fslG
VIMSS1243942 200 NSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQAWFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLG 296
************************************************************************************************* PP
DUF3573 258 nafvifGnldvspffvtaGrnklsvgalGGGGpwtsGit.nflspgkvtnvslnyksdvlnanvavfgsndrkanfstGlfyadkwtdnlavGfntG 353
nafvifGnld++p fv++G+ + svg++GGGGpwtsGit n++ p +vtn ++ny+ d+ nan +vf ++ ++a fs f a + + vGfn G
VIMSS1243942 297 NAFVIFGNLDTTPVFVSVGKYRPSVGSFGGGGPWTSGITaNMFRPLRVTNAAINYRGDTSNANFTVFDAK-NHATFSVAYFDAVSIPNIAQVGFNLG 392
***************************************9***************************986.6899********99877778****** PP
DUF3573 354 yvynlaGagns 364
y++++ Ga+n
VIMSS1243942 393 YMHDIRGANNR 403
********995 PP
== domain 2 score: -2.9 bits; conditional E-value: 0.13
DUF3573 190 flGGliead 198
+ G ++
VIMSS1243942 454 AFAGAFTVQ 462
333332222 PP
Or compare VIMSS1243942 to CDD or PaperBLAST