NP_001137683.2 has 994 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-41 126.6 24.3 3.5e-41 126.6 24.3 2.7 3 NP_001137683.2
Domain annotation for each sequence (and alignments):
>> NP_001137683.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.1 0.4 0.85 0.85 77 96 .. 355 374 .. 348 387 .. 0.61
2 ! 4.7 2.2 0.0016 0.0016 45 84 .. 711 750 .. 699 757 .. 0.70
3 ! 126.6 24.3 3.5e-41 3.5e-41 1 134 [] 839 975 .. 839 975 .. 0.97
Alignments for each domain:
== domain 1 score: -4.1 bits; conditional E-value: 0.85
bMERB_dom 77 eqelrellekedsekteedk 96
eq+lr ked+ kt d+
NP_001137683.2 355 EQDLRVESVKEDTTKTIGDN 374
45555555555555554444 PP
== domain 2 score: 4.7 bits; conditional E-value: 0.0016
bMERB_dom 45 eLvneknalvrreseLvilakeqeLeeeqaeleqelrell 84
+++ ek +l+ + +L+ +++ ++ e++q+ leq r +l
NP_001137683.2 711 KMMSEKAKLMMEKRKLNKTSDANDEERQQRLLEQARRLIL 750
5667777777777777777777777777777766655554 PP
== domain 3 score: 126.6 bits; conditional E-value: 3.5e-41
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR....eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsek 91
i++ele++e+e++++++++ +lE kLR ++ ++ee+ee+ll++wf+Lvn+knal+rr+++L+il++e++Le+++++l+qelr ++ed++k
NP_001137683.2 839 IDSELEALEREQEAIDQKASNLEAKLRavmgGNPKTEETEEQLLSQWFTLVNKKNALLRRQMQLNILEQEKDLERKYTMLNQELRAAQSVEDWRK 933
689***************************9678899********************************************************** PP
bMERB_dom 92 teedkkreeelleelveiVekRdelvesleedrlreeeedeel 134
te ++++e+ lleel++iV+kRd+lv++l+++++ ++e+d+e+
NP_001137683.2 934 TEVQREKERLLLEELMTIVDKRDQLVQHLHNQEI-AIEDDQEI 975
**********************************.99999985 PP
Or compare NP_001137683.2 to CDD or PaperBLAST