NP_001273542.1 has 1086 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-38 117.9 20.9 4.1e-38 116.7 20.9 1.6 1 NP_001273542.1
Domain annotation for each sequence (and alignments):
>> NP_001273542.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.7 20.9 4.1e-38 4.1e-38 1 127 [. 950 1077 .. 950 1080 .. 0.96
Alignments for each domain:
== domain 1 score: 116.7 bits; conditional E-value: 4.1e-38
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekt 92
iqr+l+eie+ l+ele++gv+lE +LR +s++ e++++ ++ ++++Lv +kn+lv +e+eL+i+ +e++Lee+q++l+qelr +++ e++ kt
NP_001273542.1 950 IQRRLNEIEAALRELEAEGVKLELALRrQSSSPEQQKKLWVGQLLQLVDKKNSLVAEEAELMITVQELNLEEKQWQLDQELRGYMNREENLKT 1042
8**************************7667788888889***************************************************** PP
bMERB_dom 93 eedkkreeelleelveiVekRdelvesleedrlre 127
++d+++e+++l++lv++V++Rd+l+++ ee+rl e
NP_001273542.1 1043 AADRQAEDQVLRKLVDLVNQRDALIRFQEERRLSE 1077
********************************987 PP
Or compare NP_001273542.1 to CDD or PaperBLAST