NP_505468.1 has 901 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-25 73.7 8.4 7.8e-25 73.7 8.4 2.1 2 NP_505468.1
Domain annotation for each sequence (and alignments):
>> NP_505468.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.2 0.7 0.23 0.23 65 101 .. 551 587 .. 548 594 .. 0.71
2 ! 73.7 8.4 7.8e-25 7.8e-25 2 133 .. 740 868 .. 739 869 .. 0.97
Alignments for each domain:
== domain 1 score: -2.2 bits; conditional E-value: 0.23
bMERB_dom 65 keqeLeeeqaeleqelrellekedsekteedkkreee 101
k eL ++ ++l ++ + ++++s+k +++++r ee
NP_505468.1 551 KRDELRQRARDLIEKSTTPAATPNSRKASDEERRREE 587
5667888888888888888888888887666666555 PP
== domain 2 score: 73.7 bits; conditional E-value: 7.8e-25
bMERB_dom 2 qreleeieeelkeleergvelEkkLReseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteedkkre 99
++el +i+e++++++++++++++k+Re+e g++eee l+ +++eL+ne+n+lv+r+++++i+++ ++ ++e+++l ++++e+ +d +++e+k+++
NP_505468.1 740 ANELVRIDERISDITAQADVIQDKIRETEVGSSEEEMLTASYLELTNERNTLVHRQEYYNIIETIRQVTSEIDQLGKQINEVP--DDFPRSDENKTAT 835
589*****************************************************************************996..679********** PP
bMERB_dom 100 eelleelveiVekRdelvesleedrlreeeedee 133
++l+e++ + ++ +++lv++l +++ e+eed++
NP_505468.1 836 DKLIEQYSDAMKTKSNLVQKLFATED-EIEEDSD 868
*************************9.9999975 PP
Or compare NP_505468.1 to CDD or PaperBLAST