NP_872610.2 has 687 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-43 133.6 31.0 2.5e-43 133.6 31.0 2.1 2 NP_872610.2
Domain annotation for each sequence (and alignments):
>> NP_872610.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 2.6 0.36 0.36 67 92 .. 507 532 .. 498 538 .. 0.71
2 ! 133.6 31.0 2.5e-43 2.5e-43 1 133 [. 539 672 .. 539 673 .. 0.99
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.36
bMERB_dom 67 qeLeeeqaeleqelrellekedsekt 92
+L e++ + +++l++ ++k+++ k
NP_872610.2 507 SRLKEKIPRRRRKLEKQMAKQEELKR 532
56777777777788888888777775 PP
== domain 2 score: 133.6 bits; conditional E-value: 2.5e-43
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteedkk 97
iqr+lee+ee+++ e +gv+lEk LR e+++g+++e++ll+ewf+Lv ekn+l+r+eseL i+a+e+eLe++q++leq+lr+ + k++ +k e+d k
NP_872610.2 539 IQRQLEEVEERQRTSEIQGVRLEKVLRgETDSGTQDEAQLLQEWFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLRQKMLKDEGQKDENDLK 636
8**************************9999******************************************************************* PP
bMERB_dom 98 reeelleelveiVekRdelvesleedrlreeeedee 133
+e+e++ee+++++e+R++lv+slee+r++e+++d++
NP_872610.2 637 EEQEIFEEMMQVIEQRNKLVDSLEEQRIKERTQDQH 672
**********************************97 PP
Or compare NP_872610.2 to CDD or PaperBLAST