Q69ZW3 has 1231 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-42 130.7 23.9 1.9e-42 130.7 23.9 3.7 4 Q69ZW3
Domain annotation for each sequence (and alignments):
>> Q69ZW3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.8 1.8 0.027 0.027 87 123 .. 191 226 .. 167 234 .. 0.81
2 ? -4.7 0.6 1 1 72 83 .. 816 827 .. 810 834 .. 0.41
3 ? -2.1 0.5 0.21 0.21 86 105 .. 859 878 .. 853 889 .. 0.49
4 ! 130.7 23.9 1.9e-42 1.9e-42 3 134 .] 1076 1210 .. 1074 1210 .. 0.98
Alignments for each domain:
== domain 1 score: 0.8 bits; conditional E-value: 0.027
bMERB_dom 87 edsekteedkkreeelleelveiVekRdelvesleed 123
ed+e +e++ ++ee +++ eiV++ ++l + l+ed
Q69ZW3 191 EDNEDDDENRVNQEEKAAKITEIVNQLNALSS-LDED 226
4677788888899999************9965.5554 PP
== domain 2 score: -4.7 bits; conditional E-value: 1
bMERB_dom 72 eqaeleqelrel 83
+q+el++ r l
Q69ZW3 816 RQEELKERARVL 827
333333333333 PP
== domain 3 score: -2.1 bits; conditional E-value: 0.21
bMERB_dom 86 kedsekteedkkreeellee 105
++d+e+ + ++r ++l++e
Q69ZW3 859 QQDEERRRQLRERARQLIAE 878
44444444444444444444 PP
== domain 4 score: 130.7 bits; conditional E-value: 1.9e-42
bMERB_dom 3 releeieeelkeleergvelEkkLR...eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteedkk 97
el ++e+e+k+++ r++ +Ek+LR ++ +++eeee++++ewf Lvn+knal+rr ++L++l+ke++Le++++ l++elr +l++ed++kte++k+
Q69ZW3 1076 GELAALENEQKQIDTRAALVEKRLRylmDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKR 1173
599*************************88999***************************************************************** PP
bMERB_dom 98 reeelleelveiVekRdelvesleedrlreeeedeel 134
re+ ll+elv +V+kRd+lv++l+++++++eeede+l
Q69ZW3 1174 REQLLLDELVALVDKRDALVRDLDAQEKQAEEEDEHL 1210
**********************************985 PP
Or compare Q69ZW3 to CDD or PaperBLAST