Q86BA1 has 4723 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-29 88.7 15.1 1.8e-29 88.7 15.1 4.6 4 Q86BA1
Domain annotation for each sequence (and alignments):
>> Q86BA1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.0 3.1 0.78 0.78 78 105 .. 19 46 .. 2 53 .. 0.69
2 ? -6.1 5.5 1 1 70 100 .. 783 813 .. 768 826 .. 0.55
3 ? -5.1 3.4 1 1 45 99 .. 1946 2000 .. 1924 2006 .. 0.46
4 ! 88.7 15.1 1.8e-29 1.8e-29 1 119 [. 4563 4688 .. 4563 4697 .. 0.96
Alignments for each domain:
== domain 1 score: -4.0 bits; conditional E-value: 0.78
bMERB_dom 78 qelrellekedsekteedkkreeellee 105
q+ ++ + +++++ t++++++++ l++e
Q86BA1 19 QQPQQQMPQQQQQLTAQQQQQQQLLMAE 46
4555666777778888888888888877 PP
== domain 2 score: -6.1 bits; conditional E-value: 1
bMERB_dom 70 eeeqaeleqelrellekedsekteedkkree 100
++ a++e+ ++l e+e+++++ k+r++
Q86BA1 783 VDKTANIEERQQRLQEIEENRQERMSKRRQQ 813
4444445555555555554444444444443 PP
== domain 3 score: -5.1 bits; conditional E-value: 1
bMERB_dom 45 eLvneknalvrreseLvilakeqeLeeeqaeleqelre....lleked..sekteedkkre 99
+L++ +++lv+ + ++ +Le+ + l++e r+ l+k+ ++e++++e
Q86BA1 1946 SLTRSRESLVSVSDSMS------DLEKTMDYLRNEWRNeatnFLQKKRdkFYAKKEEQEKE 2000
44444444444444444......44444444444444311113333221122233334444 PP
== domain 4 score: 88.7 bits; conditional E-value: 1.8e-29
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.......eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsek 91
iqre eeie++lk+le+rgv +Ek+LR + +++++++e+ll+e++e++++ +al +r++eL+i+++e++Le+++a+l++el+ +l++++ +k
Q86BA1 4563 IQREQEEIEVQLKDLEARGVLIEKALRgeaqnieNLDATKDNDEKLLKELLEIWRNITALKKRDEELTIRQQELQLEYRHAQLKEELNLRLSCNKLDK 4660
8******************************99988999*********************************************************** PP
bMERB_dom 92 teedkkreeelleelveiVekRdelves 119
+++d ++e +l+e++eiV kR +l +
Q86BA1 4661 SSADVAAEGAILNEMLEIVAKRAALRPT 4688
***********************99765 PP
Or compare Q86BA1 to CDD or PaperBLAST