Q8CJ19 has 1993 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-48 148.2 27.1 7.8e-48 148.2 27.1 3.5 3 Q8CJ19
Domain annotation for each sequence (and alignments):
>> Q8CJ19
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -7.4 6.5 1 1 67 103 .. 989 1025 .. 968 1034 .. 0.71
2 ? -2.3 1.9 0.24 0.24 71 100 .. 1117 1146 .. 1110 1151 .. 0.75
3 ! 148.2 27.1 7.8e-48 7.8e-48 1 134 [] 1845 1979 .. 1845 1979 .. 0.98
Alignments for each domain:
== domain 1 score: -7.4 bits; conditional E-value: 1
bMERB_dom 67 qeLeeeqaeleqelrellekedsekteedkkreeell 103
e eee +e e+e +e+ e e++e +e+ +kr ++++
Q8CJ19 989 PEEEEEEEEYEEEDEEYEEEEEEESSEAGNKRLQQII 1025
4556777777888888888888888888888888776 PP
== domain 2 score: -2.3 bits; conditional E-value: 0.24
bMERB_dom 71 eeqaeleqelrellekedsekteedkkree 100
+ qa+++ el+ +++ +++ek ++ k+ee
Q8CJ19 1117 QSQAKVKAELELRVSENEEEKPSDAPKQEE 1146
468899999999999988888776666665 PP
== domain 3 score: 148.2 bits; conditional E-value: 7.8e-48
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteedkk 97
iqr+le++ee++++leergv +Ek+LR e g++++ +l++ewf+Lv+ekna+vr+eseL+i+a+e+eLe++q++l+qelre++++ed+ kte + +
Q8CJ19 1845 IQRQLEQVEEKQRQLEERGVAVEKALRgEAGMGKKDDPKLMQEWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKTEGELS 1942
8**************************988899***************************************************************** PP
bMERB_dom 98 reeelleelveiVekRdelvesleedrlreeeedeel 134
+e+++l+e++e+Ve+Rd+lv lee+rlre+eed++l
Q8CJ19 1943 EEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDL 1979
**********************************985 PP
Or compare Q8CJ19 to CDD or PaperBLAST