XP_011241983.1 has 1257 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-42 130.7 23.9 1.9e-42 130.7 23.9 3.6 5 XP_011241983.1
Domain annotation for each sequence (and alignments):
>> XP_011241983.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.7 1.8 0.028 0.028 87 123 .. 191 226 .. 167 234 .. 0.81
2 ? -4.3 0.5 0.99 0.99 72 84 .. 816 828 .. 810 836 .. 0.42
3 ? -3.0 0.3 0.39 0.39 64 85 .. 886 907 .. 879 912 .. 0.60
4 ? -3.9 0.4 0.74 0.74 121 133 .. 1055 1067 .. 1039 1083 .. 0.66
5 ! 130.7 23.9 1.9e-42 1.9e-42 3 134 .] 1102 1236 .. 1100 1236 .. 0.98
Alignments for each domain:
== domain 1 score: 0.7 bits; conditional E-value: 0.028
bMERB_dom 87 edsekteedkkreeelleelveiVekRdelvesleed 123
ed+e +e++ ++ee +++ eiV++ ++l + l+ed
XP_011241983.1 191 EDNEDDDENRVNQEEKAAKITEIVNQLNALSS-LDED 226
4677788888899999************9965.5554 PP
== domain 2 score: -4.3 bits; conditional E-value: 0.99
bMERB_dom 72 eqaeleqelrell 84
+q+el++ r ll
XP_011241983.1 816 RQEELKERARVLL 828
3333333333333 PP
== domain 3 score: -3.0 bits; conditional E-value: 0.39
bMERB_dom 64 akeqeLeeeqaeleqelrelle 85
++ ++L e+ ++l e r+ ++
XP_011241983.1 886 ERRRQLRERARQLIAEARCGVK 907
3455666666666666666555 PP
== domain 4 score: -3.9 bits; conditional E-value: 0.74
bMERB_dom 121 eedrlreeeedee 133
e++r+r ++ed++
XP_011241983.1 1055 EMKRQRSIQEDTK 1067
4455555555543 PP
== domain 5 score: 130.7 bits; conditional E-value: 1.9e-42
bMERB_dom 3 releeieeelkeleergvelEkkLR...eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekt 92
el ++e+e+k+++ r++ +Ek+LR ++ +++eeee++++ewf Lvn+knal+rr ++L++l+ke++Le++++ l++elr +l++ed++kt
XP_011241983.1 1102 GELAALENEQKQIDTRAALVEKRLRylmDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKT 1194
599*************************88999************************************************************ PP
bMERB_dom 93 eedkkreeelleelveiVekRdelvesleedrlreeeedeel 134
e++k+re+ ll+elv +V+kRd+lv++l+++++++eeede+l
XP_011241983.1 1195 EAQKRREQLLLDELVALVDKRDALVRDLDAQEKQAEEEDEHL 1236
***************************************985 PP
Or compare XP_011241983.1 to CDD or PaperBLAST